Protein–RNA interactions for Protein: P07942

LAMB1, Laminin subunit beta-1, humanhuman

Predictions only

Length 1,786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1P07942 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.59■■■□□ 2.49
LAMB1P07942 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
LAMB1P07942 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
LAMB1P07942 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
LAMB1P07942 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
LAMB1P07942 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
LAMB1P07942 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.56■■■□□ 2.48
LAMB1P07942 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.56■■■□□ 2.48
LAMB1P07942 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
LAMB1P07942 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LAMB1P07942 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.55■■■□□ 2.48
LAMB1P07942 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.55■■■□□ 2.48
LAMB1P07942 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
LAMB1P07942 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.55■■■□□ 2.48
LAMB1P07942 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.54■■■□□ 2.48
LAMB1P07942 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
LAMB1P07942 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.53■■■□□ 2.48
LAMB1P07942 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.53■■■□□ 2.48
LAMB1P07942 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
LAMB1P07942 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
LAMB1P07942 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
LAMB1P07942 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.51■■■□□ 2.48
LAMB1P07942 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
LAMB1P07942 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
LAMB1P07942 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
LAMB1P07942 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
LAMB1P07942 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
LAMB1P07942 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
LAMB1P07942 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
LAMB1P07942 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
LAMB1P07942 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
LAMB1P07942 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
LAMB1P07942 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LAMB1P07942 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
LAMB1P07942 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
LAMB1P07942 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
LAMB1P07942 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
LAMB1P07942 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.47■■■□□ 2.47
LAMB1P07942 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
LAMB1P07942 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
LAMB1P07942 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.47■■■□□ 2.47
LAMB1P07942 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LAMB1P07942 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
LAMB1P07942 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
LAMB1P07942 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
LAMB1P07942 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
LAMB1P07942 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.46■■■□□ 2.47
LAMB1P07942 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
LAMB1P07942 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
LAMB1P07942 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.46
LAMB1P07942 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.45■■■□□ 2.46
LAMB1P07942 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.45■■■□□ 2.46
LAMB1P07942 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.44■■■□□ 2.46
LAMB1P07942 AC060814.1-201ENST00000554326 538 ntBASIC30.43■■■□□ 2.46
LAMB1P07942 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.43■■■□□ 2.46
LAMB1P07942 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
LAMB1P07942 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
LAMB1P07942 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
LAMB1P07942 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
LAMB1P07942 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.42■■■□□ 2.46
LAMB1P07942 AC148477.6-201ENST00000623746 465 ntBASIC30.42■■■□□ 2.46
LAMB1P07942 AC022413.1-201ENST00000624602 984 ntBASIC30.42■■■□□ 2.46
LAMB1P07942 AP004833.2-201ENST00000532228 1454 ntBASIC30.42■■■□□ 2.46
LAMB1P07942 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.41■■■□□ 2.46
LAMB1P07942 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
LAMB1P07942 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
LAMB1P07942 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
LAMB1P07942 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.4■■■□□ 2.46
LAMB1P07942 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.4■■■□□ 2.46
LAMB1P07942 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
LAMB1P07942 AC018358.1-201ENST00000631079 1402 ntBASIC30.39■■■□□ 2.46
LAMB1P07942 AC008813.1-201ENST00000536597 885 ntBASIC30.39■■■□□ 2.46
LAMB1P07942 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.39■■■□□ 2.46
LAMB1P07942 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.38■■■□□ 2.45
LAMB1P07942 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.38■■■□□ 2.45
LAMB1P07942 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
LAMB1P07942 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
LAMB1P07942 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC30.38■■■□□ 2.45
LAMB1P07942 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
LAMB1P07942 AL139393.2-201ENST00000608721 2025 ntBASIC30.37■■■□□ 2.45
LAMB1P07942 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.37■■■□□ 2.45
LAMB1P07942 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
LAMB1P07942 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.37■■■□□ 2.45
LAMB1P07942 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
LAMB1P07942 AC100797.4-201ENST00000631653 1827 ntBASIC30.36■■■□□ 2.45
LAMB1P07942 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
LAMB1P07942 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.36■■■□□ 2.45
LAMB1P07942 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LAMB1P07942 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
LAMB1P07942 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
LAMB1P07942 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.35■■■□□ 2.45
LAMB1P07942 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LAMB1P07942 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
LAMB1P07942 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
LAMB1P07942 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.34■■■□□ 2.45
LAMB1P07942 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.34■■■□□ 2.45
LAMB1P07942 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.34■■■□□ 2.45
LAMB1P07942 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
LAMB1P07942 AL033527.3-201ENST00000566366 1196 ntBASIC30.33■■■□□ 2.45
LAMB1P07942 AC092296.2-201ENST00000589470 999 ntBASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms