Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.05■□□□□ 0.96
CTSDP07339 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.05■□□□□ 0.96
CTSDP07339 AP002414.2-202ENST00000590929 1450 ntBASIC21.05■□□□□ 0.96
CTSDP07339 AC091060.1-201ENST00000623524 1766 ntBASIC21.05■□□□□ 0.96
CTSDP07339 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSDP07339 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSDP07339 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CTSDP07339 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CTSDP07339 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CTSDP07339 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSDP07339 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSDP07339 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSDP07339 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSDP07339 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.03■□□□□ 0.96
CTSDP07339 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSDP07339 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSDP07339 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CTSDP07339 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.03■□□□□ 0.96
CTSDP07339 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSDP07339 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CTSDP07339 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.02■□□□□ 0.96
CTSDP07339 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CTSDP07339 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.01■□□□□ 0.95
CTSDP07339 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CTSDP07339 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21■□□□□ 0.95
CTSDP07339 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CTSDP07339 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CTSDP07339 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSDP07339 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CTSDP07339 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSDP07339 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CTSDP07339 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.98■□□□□ 0.95
CTSDP07339 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CTSDP07339 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CTSDP07339 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CTSDP07339 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CTSDP07339 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTSDP07339 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CTSDP07339 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTSDP07339 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
CTSDP07339 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSDP07339 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSDP07339 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CTSDP07339 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSDP07339 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTSDP07339 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTSDP07339 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSDP07339 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTSDP07339 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTSDP07339 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSDP07339 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.94■□□□□ 0.94
CTSDP07339 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSDP07339 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.94■□□□□ 0.94
CTSDP07339 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTSDP07339 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.94■□□□□ 0.94
CTSDP07339 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.94■□□□□ 0.94
CTSDP07339 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSDP07339 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTSDP07339 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.93■□□□□ 0.94
CTSDP07339 AC145676.1-201ENST00000514988 2004 ntBASIC20.93■□□□□ 0.94
CTSDP07339 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTSDP07339 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CTSDP07339 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSDP07339 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.92■□□□□ 0.94
CTSDP07339 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CTSDP07339 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CTSDP07339 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CTSDP07339 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.91■□□□□ 0.94
CTSDP07339 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.91■□□□□ 0.94
CTSDP07339 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CTSDP07339 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.9■□□□□ 0.94
CTSDP07339 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CTSDP07339 AC018358.1-201ENST00000631079 1402 ntBASIC20.9■□□□□ 0.94
CTSDP07339 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTSDP07339 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CTSDP07339 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CTSDP07339 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.89■□□□□ 0.94
CTSDP07339 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CTSDP07339 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.89■□□□□ 0.93
CTSDP07339 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.89■□□□□ 0.93
CTSDP07339 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.88■□□□□ 0.93
CTSDP07339 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CTSDP07339 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CTSDP07339 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTSDP07339 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.87■□□□□ 0.93
CTSDP07339 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CTSDP07339 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTSDP07339 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTSDP07339 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.86■□□□□ 0.93
CTSDP07339 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.86■□□□□ 0.93
CTSDP07339 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTSDP07339 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.85■□□□□ 0.93
CTSDP07339 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSDP07339 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSDP07339 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.85■□□□□ 0.93
CTSDP07339 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTSDP07339 AC020928.2-201ENST00000588717 2197 ntBASIC20.85■□□□□ 0.93
CTSDP07339 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CTSDP07339 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.84■□□□□ 0.93
CTSDP07339 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms