Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 SGF73YGL066W 1974 nt8.17□□□□□ -1.1
RAD3P06839 YMR166CYMR166C 1107 nt8.16□□□□□ -1.1
RAD3P06839 GDH1YOR375C 1365 nt8.16□□□□□ -1.1
RAD3P06839 MRN1YPL184C 1839 nt8.13□□□□□ -1.11
RAD3P06839 TIF3YPR163C 1311 nt8.13□□□□□ -1.11
RAD3P06839 YIL177CYIL177C 5277 nt8.12□□□□□ -1.11
RAD3P06839 ADA2YDR448W 1305 nt8.12□□□□□ -1.11
RAD3P06839 YJR149WYJR149W 1215 nt8.12□□□□□ -1.11
RAD3P06839 MCM5YLR274W 2328 nt8.12□□□□□ -1.11
RAD3P06839 INO1YJL153C 1602 nt8.11□□□□□ -1.11
RAD3P06839 YER156CYER156C 1017 nt8.11□□□□□ -1.11
RAD3P06839 YNL140CYNL140C 570 nt8.11□□□□□ -1.11
RAD3P06839 GNP1YDR508C 1992 nt8.11□□□□□ -1.11
RAD3P06839 MAS1YLR163C 1389 nt8.1□□□□□ -1.11
RAD3P06839 BUD31YCR063W 474 nt8.1□□□□□ -1.11
RAD3P06839 YDR510C-AYDR510C-A 117 nt8.1□□□□□ -1.11
RAD3P06839 tL(UAA)B1tL(UAA)B1 84 nt8.1□□□□□ -1.11
RAD3P06839 tL(UAA)B2tL(UAA)B2 84 nt8.1□□□□□ -1.11
RAD3P06839 tL(UAA)DtL(UAA)D 84 nt8.1□□□□□ -1.11
RAD3P06839 SUP51tL(UAA)J 84 nt8.1□□□□□ -1.11
RAD3P06839 tL(UAA)KtL(UAA)K 84 nt8.1□□□□□ -1.11
RAD3P06839 tL(UAA)LtL(UAA)L 84 nt8.1□□□□□ -1.11
RAD3P06839 tL(UAA)NtL(UAA)N 84 nt8.1□□□□□ -1.11
RAD3P06839 RRT14YIL127C 621 nt8.1□□□□□ -1.11
RAD3P06839 TAD2YJL035C 753 nt8.1□□□□□ -1.11
RAD3P06839 BUB2YMR055C 921 nt8.1□□□□□ -1.11
RAD3P06839 GLY1YEL046C 1164 nt8.09□□□□□ -1.11
RAD3P06839 RSM7YJR113C 744 nt8.09□□□□□ -1.11
RAD3P06839 YKR018CYKR018C 2178 nt8.09□□□□□ -1.11
RAD3P06839 LRO1YNR008W 1986 nt8.08□□□□□ -1.12
RAD3P06839 YLR030WYLR030W 792 nt8.08□□□□□ -1.12
RAD3P06839 MFT1YML062C 1179 nt8.08□□□□□ -1.12
RAD3P06839 YMR206WYMR206W 942 nt8.08□□□□□ -1.12
RAD3P06839 LSP1YPL004C 1026 nt8.08□□□□□ -1.12
RAD3P06839 PPS1YBR276C 2424 nt8.07□□□□□ -1.12
RAD3P06839 PET18YCR020C 648 nt8.07□□□□□ -1.12
RAD3P06839 RPL2AYFR031C-A 765 nt8.07□□□□□ -1.12
RAD3P06839 YIR035CYIR035C 765 nt8.07□□□□□ -1.12
RAD3P06839 YGR068W-AYGR068W-A 96 nt8.06□□□□□ -1.12
RAD3P06839 INM1YHR046C 888 nt8.06□□□□□ -1.12
RAD3P06839 TGL5YOR081C 2250 nt8.06□□□□□ -1.12
RAD3P06839 TOS1YBR162C 1368 nt8.06□□□□□ -1.12
RAD3P06839 HOG1YLR113W 1308 nt8.05□□□□□ -1.12
RAD3P06839 EDC3YEL015W 1656 nt8.05□□□□□ -1.12
RAD3P06839 DIP5YPL265W 1827 nt8.05□□□□□ -1.12
RAD3P06839 TRR1YDR353W 960 nt8.03□□□□□ -1.12
RAD3P06839 CAK1YFL029C 1107 nt8.03□□□□□ -1.12
RAD3P06839 ADH6YMR318C 1083 nt8.03□□□□□ -1.12
RAD3P06839 PRB1YEL060C 1908 nt8.03□□□□□ -1.12
RAD3P06839 ELP4YPL101W 1371 nt8.02□□□□□ -1.13
RAD3P06839 RSC9YML127W 1746 nt8.02□□□□□ -1.13
RAD3P06839 UTR5YEL035C 501 nt8.01□□□□□ -1.13
RAD3P06839 TDA4YJR116W 840 nt8.01□□□□□ -1.13
RAD3P06839 YLR460CYLR460C 1131 nt8.01□□□□□ -1.13
RAD3P06839 OCH1YGL038C 1443 nt8.01□□□□□ -1.13
RAD3P06839 ICL2YPR006C 1728 nt8□□□□□ -1.13
RAD3P06839 YOR389WYOR389W 1875 nt8□□□□□ -1.13
RAD3P06839 ADE1YAR015W 921 nt7.99□□□□□ -1.13
RAD3P06839 FUS3YBL016W 1062 nt7.99□□□□□ -1.13
RAD3P06839 EHT1YBR177C 1356 nt7.98□□□□□ -1.13
RAD3P06839 KTR4YBR199W 1395 nt7.98□□□□□ -1.13
RAD3P06839 CHS7YHR142W 951 nt7.98□□□□□ -1.13
RAD3P06839 PMT1YDL095W 2454 nt7.98□□□□□ -1.13
RAD3P06839 KAE1YKR038C 1161 nt7.97□□□□□ -1.13
RAD3P06839 MET22YOL064C 1074 nt7.97□□□□□ -1.13
RAD3P06839 TOD6YBL054W 1578 nt7.97□□□□□ -1.13
RAD3P06839 YNR001W-AYNR001W-A 219 nt7.96□□□□□ -1.14
RAD3P06839 ALG7YBR243C 1347 nt7.96□□□□□ -1.14
RAD3P06839 YPR084WYPR084W 1371 nt7.96□□□□□ -1.14
RAD3P06839 ATP2YJR121W 1536 nt7.95□□□□□ -1.14
RAD3P06839 BAP3YDR046C 1815 nt7.95□□□□□ -1.14
RAD3P06839 ARO3YDR035W 1113 nt7.95□□□□□ -1.14
RAD3P06839 MRP7YNL005C 1116 nt7.95□□□□□ -1.14
RAD3P06839 RFS1YBR052C 633 nt7.95□□□□□ -1.14
RAD3P06839 SSC1YJR045C 1965 nt7.95□□□□□ -1.14
RAD3P06839 PDC6YGR087C 1692 nt7.95□□□□□ -1.14
RAD3P06839 SEC24YIL109C 2781 nt7.94□□□□□ -1.14
RAD3P06839 MAL31YBR298C 1845 nt7.94□□□□□ -1.14
RAD3P06839 PRE5YMR314W 705 nt7.94□□□□□ -1.14
RAD3P06839 RCF2YNR018W 675 nt7.94□□□□□ -1.14
RAD3P06839 NUP53YMR153W 1428 nt7.94□□□□□ -1.14
RAD3P06839 RNA170RNA170 169 nt7.93□□□□□ -1.14
RAD3P06839 BXI1YNL305C 894 nt7.93□□□□□ -1.14
RAD3P06839 CMK2YOL016C 1344 nt7.93□□□□□ -1.14
RAD3P06839 TPO1YLL028W 1761 nt7.92□□□□□ -1.14
RAD3P06839 RMD8YFR048W 1989 nt7.92□□□□□ -1.14
RAD3P06839 PPZ2YDR436W 2133 nt7.92□□□□□ -1.14
RAD3P06839 TDH1YJL052W 999 nt7.92□□□□□ -1.14
RAD3P06839 AGP2YBR132C 1791 nt7.92□□□□□ -1.14
RAD3P06839 YCR061WYCR061W 1896 nt7.92□□□□□ -1.14
RAD3P06839 YJL043WYJL043W 774 nt7.91□□□□□ -1.14
RAD3P06839 RCF1YML030W 480 nt7.91□□□□□ -1.14
RAD3P06839 ELP6YMR312W 822 nt7.91□□□□□ -1.14
RAD3P06839 RPS6AYPL090C 711 nt7.91□□□□□ -1.14
RAD3P06839 RPS6BYBR181C 711 nt7.91□□□□□ -1.14
RAD3P06839 PET494YNR045W 1470 nt7.9□□□□□ -1.14
RAD3P06839 OLA1YBR025C 1185 nt7.9□□□□□ -1.14
RAD3P06839 PDC5YLR134W 1692 nt7.89□□□□□ -1.15
RAD3P06839 WSC3YOL105C 1671 nt7.89□□□□□ -1.15
RAD3P06839 VTS1YOR359W 1572 nt7.89□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 17.7 ms