Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TCRAP04437 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
TCRAP04437 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRAP04437 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.26■□□□□ 0.67
TCRAP04437 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TCRAP04437 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TCRAP04437 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TCRAP04437 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRAP04437 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.25■□□□□ 0.67
TCRAP04437 AP002414.2-202ENST00000590929 1450 ntBASIC19.25■□□□□ 0.67
TCRAP04437 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TCRAP04437 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TCRAP04437 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRAP04437 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRAP04437 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TCRAP04437 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TCRAP04437 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRAP04437 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRAP04437 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRAP04437 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TCRAP04437 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.23■□□□□ 0.67
TCRAP04437 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.23■□□□□ 0.67
TCRAP04437 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRAP04437 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRAP04437 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRAP04437 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRAP04437 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRAP04437 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRAP04437 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRAP04437 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.22■□□□□ 0.67
TCRAP04437 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRAP04437 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRAP04437 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRAP04437 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.21■□□□□ 0.67
TCRAP04437 AC091060.1-201ENST00000623524 1766 ntBASIC19.21■□□□□ 0.67
TCRAP04437 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TCRAP04437 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRAP04437 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TCRAP04437 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRAP04437 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRAP04437 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRAP04437 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRAP04437 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRAP04437 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.19■□□□□ 0.66
TCRAP04437 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRAP04437 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.19■□□□□ 0.66
TCRAP04437 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRAP04437 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TCRAP04437 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRAP04437 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRAP04437 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TCRAP04437 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
TCRAP04437 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRAP04437 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRAP04437 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TCRAP04437 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRAP04437 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TCRAP04437 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.16■□□□□ 0.66
TCRAP04437 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TCRAP04437 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.15■□□□□ 0.66
TCRAP04437 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRAP04437 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.15■□□□□ 0.66
TCRAP04437 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
TCRAP04437 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TCRAP04437 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TCRAP04437 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.14■□□□□ 0.66
TCRAP04437 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.14■□□□□ 0.66
TCRAP04437 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRAP04437 SETD8P1-201ENST00000623146 1180 ntBASIC19.14■□□□□ 0.65
TCRAP04437 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRAP04437 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TCRAP04437 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.14■□□□□ 0.65
TCRAP04437 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.13■□□□□ 0.65
TCRAP04437 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC19.13■□□□□ 0.65
TCRAP04437 RARRES2P7-201ENST00000567349 469 ntBASIC19.13■□□□□ 0.65
TCRAP04437 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRAP04437 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRAP04437 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRAP04437 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRAP04437 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRAP04437 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRAP04437 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRAP04437 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TCRAP04437 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRAP04437 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRAP04437 AC018358.1-201ENST00000631079 1402 ntBASIC19.11■□□□□ 0.65
TCRAP04437 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRAP04437 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.11■□□□□ 0.65
TCRAP04437 AC145676.1-201ENST00000514988 2004 ntBASIC19.11■□□□□ 0.65
TCRAP04437 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TCRAP04437 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRAP04437 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRAP04437 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.1■□□□□ 0.65
TCRAP04437 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRAP04437 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TCRAP04437 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRAP04437 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRAP04437 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TCRAP04437 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.08■□□□□ 0.65
TCRAP04437 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms