Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
IghmP01872 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IghmP01872 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
IghmP01872 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
IghmP01872 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IghmP01872 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
IghmP01872 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
IghmP01872 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
IghmP01872 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
IghmP01872 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
IghmP01872 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
IghmP01872 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
IghmP01872 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
IghmP01872 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
IghmP01872 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
IghmP01872 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
IghmP01872 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
IghmP01872 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
IghmP01872 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
IghmP01872 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.87■■□□□ 1.09
IghmP01872 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IghmP01872 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
IghmP01872 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
IghmP01872 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
IghmP01872 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
IghmP01872 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
IghmP01872 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
IghmP01872 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
IghmP01872 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
IghmP01872 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
IghmP01872 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
IghmP01872 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.84■■□□□ 1.09
IghmP01872 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IghmP01872 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
IghmP01872 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IghmP01872 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
IghmP01872 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
IghmP01872 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
IghmP01872 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
IghmP01872 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
IghmP01872 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
IghmP01872 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IghmP01872 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IghmP01872 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IghmP01872 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
IghmP01872 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.81■■□□□ 1.08
IghmP01872 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
IghmP01872 Nkain2-201ENSMUST00000092602 558 ntBASIC21.81■■□□□ 1.08
IghmP01872 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
IghmP01872 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IghmP01872 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
IghmP01872 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
IghmP01872 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IghmP01872 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
IghmP01872 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.79■■□□□ 1.08
IghmP01872 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.78■■□□□ 1.08
IghmP01872 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
IghmP01872 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
IghmP01872 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.77■■□□□ 1.08
IghmP01872 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
IghmP01872 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
IghmP01872 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
IghmP01872 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
IghmP01872 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.75■■□□□ 1.07
IghmP01872 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
IghmP01872 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.75■■□□□ 1.07
IghmP01872 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
IghmP01872 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
IghmP01872 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IghmP01872 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IghmP01872 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
IghmP01872 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
IghmP01872 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
IghmP01872 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.71■■□□□ 1.07
IghmP01872 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IghmP01872 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
IghmP01872 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
IghmP01872 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.7■■□□□ 1.06
IghmP01872 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
IghmP01872 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
IghmP01872 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
IghmP01872 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IghmP01872 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.68■■□□□ 1.06
IghmP01872 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IghmP01872 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
IghmP01872 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IghmP01872 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
IghmP01872 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
IghmP01872 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IghmP01872 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
IghmP01872 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
IghmP01872 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
IghmP01872 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
IghmP01872 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IghmP01872 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
IghmP01872 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
IghmP01872 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
IghmP01872 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IghmP01872 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
IghmP01872 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms