Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Igh-VJ558P01758 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igh-VJ558P01758 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Igh-VJ558P01758 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Igh-VJ558P01758 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Igh-VJ558P01758 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Igh-VJ558P01758 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.28■□□□□ 0.84
Igh-VJ558P01758 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Igh-VJ558P01758 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igh-VJ558P01758 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Igh-VJ558P01758 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.26■□□□□ 0.83
Igh-VJ558P01758 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Igh-VJ558P01758 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Igh-VJ558P01758 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.25■□□□□ 0.83
Igh-VJ558P01758 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Igh-VJ558P01758 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Igh-VJ558P01758 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Igh-VJ558P01758 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.23■□□□□ 0.83
Igh-VJ558P01758 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Igh-VJ558P01758 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igh-VJ558P01758 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Igh-VJ558P01758 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igh-VJ558P01758 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Igh-VJ558P01758 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Igh-VJ558P01758 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igh-VJ558P01758 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Igh-VJ558P01758 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Igh-VJ558P01758 Gm6821-201ENSMUST00000107540 542 ntBASIC20.21■□□□□ 0.83
Igh-VJ558P01758 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Igh-VJ558P01758 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Igh-VJ558P01758 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igh-VJ558P01758 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igh-VJ558P01758 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igh-VJ558P01758 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igh-VJ558P01758 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igh-VJ558P01758 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igh-VJ558P01758 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igh-VJ558P01758 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Igh-VJ558P01758 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Igh-VJ558P01758 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igh-VJ558P01758 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Igh-VJ558P01758 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Igh-VJ558P01758 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igh-VJ558P01758 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igh-VJ558P01758 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Igh-VJ558P01758 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igh-VJ558P01758 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igh-VJ558P01758 Gm8503-201ENSMUST00000118131 455 ntBASIC20.14■□□□□ 0.81
Igh-VJ558P01758 Gm37136-201ENSMUST00000194368 194 ntBASIC20.14■□□□□ 0.81
Igh-VJ558P01758 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igh-VJ558P01758 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igh-VJ558P01758 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igh-VJ558P01758 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.13■□□□□ 0.81
Igh-VJ558P01758 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igh-VJ558P01758 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Igh-VJ558P01758 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Igh-VJ558P01758 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Igh-VJ558P01758 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.1■□□□□ 0.81
Igh-VJ558P01758 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igh-VJ558P01758 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igh-VJ558P01758 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igh-VJ558P01758 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igh-VJ558P01758 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igh-VJ558P01758 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Igh-VJ558P01758 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igh-VJ558P01758 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Igh-VJ558P01758 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Igh-VJ558P01758 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.08■□□□□ 0.81
Igh-VJ558P01758 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Igh-VJ558P01758 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Igh-VJ558P01758 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igh-VJ558P01758 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igh-VJ558P01758 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igh-VJ558P01758 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Igh-VJ558P01758 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Igh-VJ558P01758 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igh-VJ558P01758 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.06■□□□□ 0.8
Igh-VJ558P01758 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igh-VJ558P01758 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Igh-VJ558P01758 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.05■□□□□ 0.8
Igh-VJ558P01758 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igh-VJ558P01758 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Igh-VJ558P01758 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igh-VJ558P01758 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Igh-VJ558P01758 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igh-VJ558P01758 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Igh-VJ558P01758 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Igh-VJ558P01758 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Igh-VJ558P01758 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Igh-VJ558P01758 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Igh-VJ558P01758 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 503.8 ms