Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Hcn1O88704 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Hcn1O88704 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Hcn1O88704 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.05■■□□□ 1.12
Hcn1O88704 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hcn1O88704 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Hcn1O88704 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hcn1O88704 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Hcn1O88704 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Hcn1O88704 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Hcn1O88704 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Hcn1O88704 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Hcn1O88704 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Hcn1O88704 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Hcn1O88704 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hcn1O88704 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.02■■□□□ 1.12
Hcn1O88704 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hcn1O88704 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Hcn1O88704 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Hcn1O88704 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Hcn1O88704 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.02■■□□□ 1.12
Hcn1O88704 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Hcn1O88704 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Hcn1O88704 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22■■□□□ 1.11
Hcn1O88704 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22■■□□□ 1.11
Hcn1O88704 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hcn1O88704 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Hcn1O88704 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hcn1O88704 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Hcn1O88704 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Hcn1O88704 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.99■■□□□ 1.11
Hcn1O88704 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hcn1O88704 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.98■■□□□ 1.11
Hcn1O88704 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Hcn1O88704 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Hcn1O88704 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Hcn1O88704 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.97■■□□□ 1.11
Hcn1O88704 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hcn1O88704 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hcn1O88704 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Hcn1O88704 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Hcn1O88704 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Hcn1O88704 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Hcn1O88704 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Hcn1O88704 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.93■■□□□ 1.1
Hcn1O88704 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Hcn1O88704 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Hcn1O88704 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.93■■□□□ 1.1
Hcn1O88704 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Hcn1O88704 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hcn1O88704 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Hcn1O88704 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Hcn1O88704 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Hcn1O88704 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Hcn1O88704 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Hcn1O88704 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hcn1O88704 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hcn1O88704 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Hcn1O88704 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Hcn1O88704 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.91■■□□□ 1.1
Hcn1O88704 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hcn1O88704 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hcn1O88704 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Hcn1O88704 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.9■■□□□ 1.1
Hcn1O88704 Gm7432-201ENSMUST00000210343 879 ntBASIC21.9■■□□□ 1.1
Hcn1O88704 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hcn1O88704 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Hcn1O88704 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Hcn1O88704 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.89■■□□□ 1.09
Hcn1O88704 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Hcn1O88704 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.88■■□□□ 1.09
Hcn1O88704 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.88■■□□□ 1.09
Hcn1O88704 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Hcn1O88704 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Hcn1O88704 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hcn1O88704 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Hcn1O88704 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Hcn1O88704 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.85■■□□□ 1.09
Hcn1O88704 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Hcn1O88704 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Hcn1O88704 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Hcn1O88704 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hcn1O88704 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hcn1O88704 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Hcn1O88704 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hcn1O88704 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
Hcn1O88704 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.84■■□□□ 1.09
Hcn1O88704 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Hcn1O88704 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Hcn1O88704 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hcn1O88704 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Hcn1O88704 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.82■■□□□ 1.08
Hcn1O88704 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Hcn1O88704 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
Hcn1O88704 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hcn1O88704 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hcn1O88704 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Hcn1O88704 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.81■■□□□ 1.08
Hcn1O88704 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Hcn1O88704 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms