Protein–RNA interactions for Protein: O88572

Lrp6, Low-density lipoprotein receptor-related protein 6, mousemouse

Predictions only

Length 1,613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrp6O88572 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Lrp6O88572 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC31.73■■■□□ 2.67
Lrp6O88572 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
Lrp6O88572 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
Lrp6O88572 Gm13889-201ENSMUST00000099689 1386 ntBASIC31.71■■■□□ 2.67
Lrp6O88572 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Lrp6O88572 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC31.71■■■□□ 2.67
Lrp6O88572 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC31.71■■■□□ 2.67
Lrp6O88572 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Lrp6O88572 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Lrp6O88572 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.7■■■□□ 2.67
Lrp6O88572 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Lrp6O88572 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Lrp6O88572 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
Lrp6O88572 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
Lrp6O88572 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.66■■■□□ 2.66
Lrp6O88572 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Lrp6O88572 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC31.64■■■□□ 2.66
Lrp6O88572 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Lrp6O88572 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Lrp6O88572 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.65
Lrp6O88572 Gm15820-201ENSMUST00000201566 728 ntBASIC31.64■■■□□ 2.65
Lrp6O88572 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC31.64■■■□□ 2.65
Lrp6O88572 Gm37136-201ENSMUST00000194368 194 ntBASIC31.63■■■□□ 2.65
Lrp6O88572 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Lrp6O88572 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Lrp6O88572 Gm14117-201ENSMUST00000122417 843 ntBASIC31.6■■■□□ 2.65
Lrp6O88572 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC31.6■■■□□ 2.65
Lrp6O88572 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC31.6■■■□□ 2.65
Lrp6O88572 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Lrp6O88572 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC31.58■■■□□ 2.65
Lrp6O88572 Gm45102-201ENSMUST00000207427 857 ntBASIC31.58■■■□□ 2.65
Lrp6O88572 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Lrp6O88572 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC31.57■■■□□ 2.64
Lrp6O88572 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Lrp6O88572 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC31.57■■■□□ 2.64
Lrp6O88572 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Lrp6O88572 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC31.56■■■□□ 2.64
Lrp6O88572 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.55■■■□□ 2.64
Lrp6O88572 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Lrp6O88572 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Lrp6O88572 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
Lrp6O88572 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Lrp6O88572 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC31.53■■■□□ 2.64
Lrp6O88572 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Lrp6O88572 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Lrp6O88572 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Lrp6O88572 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Lrp6O88572 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC31.52■■■□□ 2.64
Lrp6O88572 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.64
Lrp6O88572 Gm13238-201ENSMUST00000117655 780 ntBASIC31.51■■■□□ 2.63
Lrp6O88572 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Lrp6O88572 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Lrp6O88572 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Lrp6O88572 AC122317.2-201ENSMUST00000218708 1248 ntBASIC31.49■■■□□ 2.63
Lrp6O88572 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC31.49■■■□□ 2.63
Lrp6O88572 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Lrp6O88572 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.48■■■□□ 2.63
Lrp6O88572 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Lrp6O88572 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
Lrp6O88572 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Lrp6O88572 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Lrp6O88572 AC153911.1-201ENSMUST00000220378 758 ntBASIC31.46■■■□□ 2.63
Lrp6O88572 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Lrp6O88572 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Lrp6O88572 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Lrp6O88572 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC31.46■■■□□ 2.63
Lrp6O88572 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC31.46■■■□□ 2.63
Lrp6O88572 Serp2-204ENSMUST00000228055 705 ntBASIC31.46■■■□□ 2.63
Lrp6O88572 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Lrp6O88572 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
Lrp6O88572 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Lrp6O88572 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Lrp6O88572 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC31.42■■■□□ 2.62
Lrp6O88572 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
Lrp6O88572 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC31.42■■■□□ 2.62
Lrp6O88572 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
Lrp6O88572 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Lrp6O88572 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC31.41■■■□□ 2.62
Lrp6O88572 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Lrp6O88572 Gm43566-201ENSMUST00000196851 808 ntBASIC31.4■■■□□ 2.62
Lrp6O88572 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Lrp6O88572 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Lrp6O88572 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Lrp6O88572 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC31.38■■■□□ 2.61
Lrp6O88572 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Lrp6O88572 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Lrp6O88572 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Lrp6O88572 Gm5297-201ENSMUST00000198555 1171 ntBASIC31.36■■■□□ 2.61
Lrp6O88572 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC31.36■■■□□ 2.61
Lrp6O88572 Gm9812-201ENSMUST00000061934 968 ntBASIC31.35■■■□□ 2.61
Lrp6O88572 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC31.35■■■□□ 2.61
Lrp6O88572 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Lrp6O88572 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
Lrp6O88572 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Lrp6O88572 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
Lrp6O88572 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Lrp6O88572 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC31.33■■■□□ 2.61
Lrp6O88572 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC31.33■■■□□ 2.61
Lrp6O88572 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms