Protein–RNA interactions for Protein: O75154

RAB11FIP3, Rab11 family-interacting protein 3, humanhuman

Predictions only

Length 756 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3O75154 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
RAB11FIP3O75154 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
RAB11FIP3O75154 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RAB11FIP3O75154 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.48■■■□□ 2.63
RAB11FIP3O75154 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.48■■■□□ 2.63
RAB11FIP3O75154 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
RAB11FIP3O75154 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
RAB11FIP3O75154 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RAB11FIP3O75154 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RAB11FIP3O75154 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
RAB11FIP3O75154 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.46■■■□□ 2.63
RAB11FIP3O75154 DUX4L13-201ENST00000554103 1267 ntBASIC31.46■■■□□ 2.63
RAB11FIP3O75154 DUX4L15-201ENST00000611059 1267 ntBASIC31.46■■■□□ 2.63
RAB11FIP3O75154 DUX4L23-201ENST00000615195 1269 ntBASIC31.46■■■□□ 2.63
RAB11FIP3O75154 DUX4L24-201ENST00000617576 1269 ntBASIC31.46■■■□□ 2.63
RAB11FIP3O75154 DUX4L22-201ENST00000618238 1269 ntBASIC31.46■■■□□ 2.63
RAB11FIP3O75154 DUX4L20-201ENST00000619712 1269 ntBASIC31.46■■■□□ 2.63
RAB11FIP3O75154 DUX4L21-201ENST00000622058 1269 ntBASIC31.46■■■□□ 2.63
RAB11FIP3O75154 DUX4L10-201ENST00000622460 1267 ntBASIC31.46■■■□□ 2.63
RAB11FIP3O75154 DUX4L25-201ENST00000624915 1269 ntBASIC31.46■■■□□ 2.63
RAB11FIP3O75154 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
RAB11FIP3O75154 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.45■■■□□ 2.63
RAB11FIP3O75154 AC110285.7-201ENST00000624417 1536 ntBASIC31.44■■■□□ 2.62
RAB11FIP3O75154 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
RAB11FIP3O75154 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.43■■■□□ 2.62
RAB11FIP3O75154 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.43■■■□□ 2.62
RAB11FIP3O75154 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RAB11FIP3O75154 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
RAB11FIP3O75154 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.42■■■□□ 2.62
RAB11FIP3O75154 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.42■■■□□ 2.62
RAB11FIP3O75154 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.41■■■□□ 2.62
RAB11FIP3O75154 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
RAB11FIP3O75154 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
RAB11FIP3O75154 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC31.4■■■□□ 2.62
RAB11FIP3O75154 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
RAB11FIP3O75154 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.39■■■□□ 2.62
RAB11FIP3O75154 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
RAB11FIP3O75154 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.61
RAB11FIP3O75154 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RAB11FIP3O75154 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.38■■■□□ 2.61
RAB11FIP3O75154 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RAB11FIP3O75154 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RAB11FIP3O75154 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.37■■■□□ 2.61
RAB11FIP3O75154 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.37■■■□□ 2.61
RAB11FIP3O75154 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
RAB11FIP3O75154 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RAB11FIP3O75154 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.35■■■□□ 2.61
RAB11FIP3O75154 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.35■■■□□ 2.61
RAB11FIP3O75154 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RAB11FIP3O75154 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.35■■■□□ 2.61
RAB11FIP3O75154 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RAB11FIP3O75154 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.34■■■□□ 2.61
RAB11FIP3O75154 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
RAB11FIP3O75154 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
RAB11FIP3O75154 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
RAB11FIP3O75154 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RAB11FIP3O75154 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
RAB11FIP3O75154 MIR7108-201ENST00000614319 87 ntBASIC31.33■■■□□ 2.61
RAB11FIP3O75154 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.33■■■□□ 2.61
RAB11FIP3O75154 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
RAB11FIP3O75154 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
RAB11FIP3O75154 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.31■■■□□ 2.6
RAB11FIP3O75154 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.3■■■□□ 2.6
RAB11FIP3O75154 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RAB11FIP3O75154 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
RAB11FIP3O75154 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.3■■■□□ 2.6
RAB11FIP3O75154 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.3■■■□□ 2.6
RAB11FIP3O75154 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RAB11FIP3O75154 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.3■■■□□ 2.6
RAB11FIP3O75154 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
RAB11FIP3O75154 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
RAB11FIP3O75154 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
RAB11FIP3O75154 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
RAB11FIP3O75154 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RAB11FIP3O75154 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RAB11FIP3O75154 AC018358.1-201ENST00000631079 1402 ntBASIC31.27■■■□□ 2.6
RAB11FIP3O75154 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RAB11FIP3O75154 CR559946.2-201ENST00000623684 991 ntBASIC31.27■■■□□ 2.6
RAB11FIP3O75154 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
RAB11FIP3O75154 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RAB11FIP3O75154 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
RAB11FIP3O75154 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RAB11FIP3O75154 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
RAB11FIP3O75154 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.26■■■□□ 2.59
RAB11FIP3O75154 MIR3648-2-201ENST00000581792 180 ntBASIC31.26■■■□□ 2.59
RAB11FIP3O75154 MIR3648-1-201ENST00000615959 180 ntBASIC31.26■■■□□ 2.59
RAB11FIP3O75154 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RAB11FIP3O75154 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
RAB11FIP3O75154 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
RAB11FIP3O75154 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.25■■■□□ 2.59
RAB11FIP3O75154 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.25■■■□□ 2.59
RAB11FIP3O75154 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RAB11FIP3O75154 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
RAB11FIP3O75154 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.24■■■□□ 2.59
RAB11FIP3O75154 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RAB11FIP3O75154 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RAB11FIP3O75154 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
RAB11FIP3O75154 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
RAB11FIP3O75154 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
RAB11FIP3O75154 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms