Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SncaO55042 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SncaO55042 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SncaO55042 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.09■□□□□ 0.65
SncaO55042 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SncaO55042 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SncaO55042 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SncaO55042 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.08■□□□□ 0.64
SncaO55042 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SncaO55042 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SncaO55042 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SncaO55042 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SncaO55042 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SncaO55042 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SncaO55042 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SncaO55042 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
SncaO55042 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SncaO55042 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SncaO55042 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SncaO55042 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SncaO55042 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SncaO55042 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SncaO55042 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SncaO55042 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SncaO55042 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.05■□□□□ 0.64
SncaO55042 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.04■□□□□ 0.64
SncaO55042 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.04■□□□□ 0.64
SncaO55042 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SncaO55042 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SncaO55042 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SncaO55042 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SncaO55042 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SncaO55042 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SncaO55042 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SncaO55042 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SncaO55042 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SncaO55042 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SncaO55042 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SncaO55042 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SncaO55042 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SncaO55042 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
SncaO55042 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
SncaO55042 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SncaO55042 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SncaO55042 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
SncaO55042 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SncaO55042 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SncaO55042 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SncaO55042 Gm30023-201ENSMUST00000197970 889 ntBASIC19.01■□□□□ 0.63
SncaO55042 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SncaO55042 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SncaO55042 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SncaO55042 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SncaO55042 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SncaO55042 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
SncaO55042 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SncaO55042 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SncaO55042 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SncaO55042 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SncaO55042 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SncaO55042 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SncaO55042 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SncaO55042 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.97■□□□□ 0.63
SncaO55042 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.97■□□□□ 0.63
SncaO55042 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SncaO55042 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SncaO55042 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
SncaO55042 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
SncaO55042 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SncaO55042 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SncaO55042 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SncaO55042 Particl-201ENSMUST00000205370 1560 ntBASIC18.93■□□□□ 0.62
SncaO55042 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SncaO55042 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SncaO55042 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SncaO55042 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SncaO55042 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.93■□□□□ 0.62
SncaO55042 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SncaO55042 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SncaO55042 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SncaO55042 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SncaO55042 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SncaO55042 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.92■□□□□ 0.62
SncaO55042 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SncaO55042 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SncaO55042 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SncaO55042 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SncaO55042 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.91■□□□□ 0.62
SncaO55042 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SncaO55042 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SncaO55042 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SncaO55042 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SncaO55042 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SncaO55042 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SncaO55042 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SncaO55042 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SncaO55042 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SncaO55042 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SncaO55042 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SncaO55042 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms