Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rnf13O54965 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.97■□□□□ 0.95
Rnf13O54965 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.97■□□□□ 0.95
Rnf13O54965 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf13O54965 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rnf13O54965 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.97■□□□□ 0.95
Rnf13O54965 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.97■□□□□ 0.95
Rnf13O54965 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf13O54965 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Rnf13O54965 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf13O54965 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf13O54965 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf13O54965 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf13O54965 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rnf13O54965 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rnf13O54965 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Rnf13O54965 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Rnf13O54965 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.94■□□□□ 0.94
Rnf13O54965 Gm9397-201ENSMUST00000200125 605 ntBASIC20.94■□□□□ 0.94
Rnf13O54965 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rnf13O54965 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.94■□□□□ 0.94
Rnf13O54965 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.94■□□□□ 0.94
Rnf13O54965 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rnf13O54965 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf13O54965 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rnf13O54965 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf13O54965 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf13O54965 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rnf13O54965 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Rnf13O54965 Gm24970-201ENSMUST00000175582 82 ntBASIC20.91■□□□□ 0.94
Rnf13O54965 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.91■□□□□ 0.94
Rnf13O54965 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rnf13O54965 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.9■□□□□ 0.94
Rnf13O54965 Gm30023-201ENSMUST00000197970 889 ntBASIC20.89■□□□□ 0.93
Rnf13O54965 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rnf13O54965 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf13O54965 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf13O54965 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf13O54965 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rnf13O54965 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.88■□□□□ 0.93
Rnf13O54965 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
Rnf13O54965 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf13O54965 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf13O54965 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.87■□□□□ 0.93
Rnf13O54965 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf13O54965 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.87■□□□□ 0.93
Rnf13O54965 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf13O54965 Particl-201ENSMUST00000205370 1560 ntBASIC20.87■□□□□ 0.93
Rnf13O54965 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf13O54965 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf13O54965 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf13O54965 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf13O54965 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf13O54965 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf13O54965 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf13O54965 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf13O54965 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf13O54965 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf13O54965 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf13O54965 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf13O54965 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf13O54965 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf13O54965 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.84■□□□□ 0.93
Rnf13O54965 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf13O54965 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf13O54965 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rnf13O54965 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf13O54965 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf13O54965 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf13O54965 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Rnf13O54965 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Rnf13O54965 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf13O54965 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rnf13O54965 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rnf13O54965 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.81■□□□□ 0.92
Rnf13O54965 Gm45855-201ENSMUST00000212546 880 ntBASIC20.81■□□□□ 0.92
Rnf13O54965 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf13O54965 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf13O54965 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf13O54965 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf13O54965 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf13O54965 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf13O54965 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf13O54965 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf13O54965 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
Rnf13O54965 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.78■□□□□ 0.92
Rnf13O54965 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf13O54965 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf13O54965 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf13O54965 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf13O54965 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf13O54965 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf13O54965 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf13O54965 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf13O54965 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rnf13O54965 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf13O54965 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.75■□□□□ 0.91
Rnf13O54965 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf13O54965 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf13O54965 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms