Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
KCNQ3O43525 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
KCNQ3O43525 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC33.1■■■□□ 2.89
KCNQ3O43525 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC33.1■■■□□ 2.89
KCNQ3O43525 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC33.1■■■□□ 2.89
KCNQ3O43525 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.89
KCNQ3O43525 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
KCNQ3O43525 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC33.09■■■□□ 2.89
KCNQ3O43525 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
KCNQ3O43525 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
KCNQ3O43525 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC33.07■■■□□ 2.89
KCNQ3O43525 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC33.07■■■□□ 2.88
KCNQ3O43525 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
KCNQ3O43525 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC33.07■■■□□ 2.88
KCNQ3O43525 AC022413.1-201ENST00000624602 984 ntBASIC33.07■■■□□ 2.88
KCNQ3O43525 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
KCNQ3O43525 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
KCNQ3O43525 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC33.06■■■□□ 2.88
KCNQ3O43525 RPS2-210ENST00000530225 765 ntTSL 2 BASIC33.06■■■□□ 2.88
KCNQ3O43525 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
KCNQ3O43525 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC33.06■■■□□ 2.88
KCNQ3O43525 RNF126P1-201ENST00000567452 1320 ntBASIC33.05■■■□□ 2.88
KCNQ3O43525 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
KCNQ3O43525 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC33.05■■■□□ 2.88
KCNQ3O43525 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
KCNQ3O43525 ST7-205ENST00000393446 2114 ntTSL 5 BASIC33.05■■■□□ 2.88
KCNQ3O43525 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
KCNQ3O43525 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC33.04■■■□□ 2.88
KCNQ3O43525 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC33.04■■■□□ 2.88
KCNQ3O43525 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
KCNQ3O43525 AC100797.4-201ENST00000631653 1827 ntBASIC33.02■■■□□ 2.88
KCNQ3O43525 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
KCNQ3O43525 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
KCNQ3O43525 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC33.02■■■□□ 2.88
KCNQ3O43525 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC33.02■■■□□ 2.88
KCNQ3O43525 AC148477.6-201ENST00000623746 465 ntBASIC33.02■■■□□ 2.88
KCNQ3O43525 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
KCNQ3O43525 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
KCNQ3O43525 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.88
KCNQ3O43525 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC33.01■■■□□ 2.87
KCNQ3O43525 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
KCNQ3O43525 MIR219A2-201ENST00000608502 1504 ntBASIC33■■■□□ 2.87
KCNQ3O43525 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC33■■■□□ 2.87
KCNQ3O43525 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.99■■■□□ 2.87
KCNQ3O43525 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
KCNQ3O43525 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC32.99■■■□□ 2.87
KCNQ3O43525 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
KCNQ3O43525 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
KCNQ3O43525 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
KCNQ3O43525 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC32.98■■■□□ 2.87
KCNQ3O43525 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
KCNQ3O43525 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.97■■■□□ 2.87
KCNQ3O43525 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.96■■■□□ 2.87
KCNQ3O43525 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.96■■■□□ 2.87
KCNQ3O43525 ABCB10P1-201ENST00000614297 2181 ntBASIC32.94■■■□□ 2.86
KCNQ3O43525 AP004833.2-201ENST00000532228 1454 ntBASIC32.94■■■□□ 2.86
KCNQ3O43525 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.94■■■□□ 2.86
KCNQ3O43525 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC32.94■■■□□ 2.86
KCNQ3O43525 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
KCNQ3O43525 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
KCNQ3O43525 ABHD17AP5-201ENST00000580133 923 ntBASIC32.93■■■□□ 2.86
KCNQ3O43525 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.93■■■□□ 2.86
KCNQ3O43525 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.93■■■□□ 2.86
KCNQ3O43525 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
KCNQ3O43525 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
KCNQ3O43525 AC060814.1-201ENST00000554326 538 ntBASIC32.92■■■□□ 2.86
KCNQ3O43525 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
KCNQ3O43525 AL139393.2-201ENST00000608721 2025 ntBASIC32.92■■■□□ 2.86
KCNQ3O43525 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.92■■■□□ 2.86
KCNQ3O43525 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.91■■■□□ 2.86
KCNQ3O43525 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
KCNQ3O43525 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
KCNQ3O43525 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.89■■■□□ 2.86
KCNQ3O43525 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.89■■■□□ 2.86
KCNQ3O43525 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.88■■■□□ 2.85
KCNQ3O43525 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
KCNQ3O43525 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.88■■■□□ 2.85
KCNQ3O43525 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
KCNQ3O43525 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.86■■■□□ 2.85
KCNQ3O43525 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
KCNQ3O43525 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
KCNQ3O43525 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
KCNQ3O43525 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.84■■■□□ 2.85
KCNQ3O43525 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.84■■■□□ 2.85
KCNQ3O43525 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
KCNQ3O43525 ST7-202ENST00000323984 2142 ntTSL 5 BASIC32.83■■■□□ 2.85
KCNQ3O43525 ST7-207ENST00000393449 2127 ntTSL 5 BASIC32.83■■■□□ 2.85
KCNQ3O43525 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
KCNQ3O43525 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
KCNQ3O43525 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
KCNQ3O43525 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
KCNQ3O43525 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.82■■■□□ 2.84
KCNQ3O43525 ABCB10P3-201ENST00000561950 2166 ntBASIC32.81■■■□□ 2.84
KCNQ3O43525 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.81■■■□□ 2.84
KCNQ3O43525 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.8■■■□□ 2.84
KCNQ3O43525 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
KCNQ3O43525 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
KCNQ3O43525 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.8■■■□□ 2.84
KCNQ3O43525 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
KCNQ3O43525 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms