Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
ABCC4O15439 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.68■■■□□ 2.82
ABCC4O15439 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.67■■■□□ 2.82
ABCC4O15439 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
ABCC4O15439 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.67■■■□□ 2.82
ABCC4O15439 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC32.66■■■□□ 2.82
ABCC4O15439 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ABCC4O15439 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ABCC4O15439 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC32.65■■■□□ 2.82
ABCC4O15439 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ABCC4O15439 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC32.65■■■□□ 2.82
ABCC4O15439 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.64■■■□□ 2.82
ABCC4O15439 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC32.63■■■□□ 2.81
ABCC4O15439 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.63■■■□□ 2.81
ABCC4O15439 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
ABCC4O15439 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC32.63■■■□□ 2.81
ABCC4O15439 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.63■■■□□ 2.81
ABCC4O15439 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
ABCC4O15439 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.62■■■□□ 2.81
ABCC4O15439 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.62■■■□□ 2.81
ABCC4O15439 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.61■■■□□ 2.81
ABCC4O15439 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC32.61■■■□□ 2.81
ABCC4O15439 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.61■■■□□ 2.81
ABCC4O15439 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
ABCC4O15439 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC32.6■■■□□ 2.81
ABCC4O15439 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ABCC4O15439 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ABCC4O15439 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.59■■■□□ 2.81
ABCC4O15439 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC32.59■■■□□ 2.81
ABCC4O15439 AC100797.4-201ENST00000631653 1827 ntBASIC32.59■■■□□ 2.81
ABCC4O15439 DRD5P2-201ENST00000421395 2012 ntBASIC32.59■■■□□ 2.81
ABCC4O15439 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
ABCC4O15439 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.58■■■□□ 2.81
ABCC4O15439 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
ABCC4O15439 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
ABCC4O15439 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
ABCC4O15439 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
ABCC4O15439 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
ABCC4O15439 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.56■■■□□ 2.8
ABCC4O15439 MEST-211ENST00000437945 1455 ntTSL 5 BASIC32.55■■■□□ 2.8
ABCC4O15439 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32.54■■■□□ 2.8
ABCC4O15439 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.54■■■□□ 2.8
ABCC4O15439 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.54■■■□□ 2.8
ABCC4O15439 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.54■■■□□ 2.8
ABCC4O15439 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC32.54■■■□□ 2.8
ABCC4O15439 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
ABCC4O15439 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
ABCC4O15439 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
ABCC4O15439 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
ABCC4O15439 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.53■■■□□ 2.8
ABCC4O15439 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
ABCC4O15439 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
ABCC4O15439 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
ABCC4O15439 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
ABCC4O15439 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
ABCC4O15439 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.52■■■□□ 2.8
ABCC4O15439 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ABCC4O15439 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ABCC4O15439 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.52■■■□□ 2.8
ABCC4O15439 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32.51■■■□□ 2.8
ABCC4O15439 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.51■■■□□ 2.8
ABCC4O15439 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ABCC4O15439 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ABCC4O15439 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ABCC4O15439 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ABCC4O15439 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ABCC4O15439 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
ABCC4O15439 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
ABCC4O15439 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
ABCC4O15439 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
ABCC4O15439 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC32.5■■■□□ 2.79
ABCC4O15439 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC32.5■■■□□ 2.79
ABCC4O15439 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.5■■■□□ 2.79
ABCC4O15439 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.5■■■□□ 2.79
ABCC4O15439 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.5■■■□□ 2.79
ABCC4O15439 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
ABCC4O15439 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.49■■■□□ 2.79
ABCC4O15439 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.49■■■□□ 2.79
ABCC4O15439 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC32.49■■■□□ 2.79
ABCC4O15439 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.49■■■□□ 2.79
ABCC4O15439 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
ABCC4O15439 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
ABCC4O15439 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
ABCC4O15439 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
ABCC4O15439 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.47■■■□□ 2.79
ABCC4O15439 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.46■■■□□ 2.79
ABCC4O15439 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.46■■■□□ 2.79
ABCC4O15439 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
ABCC4O15439 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
ABCC4O15439 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
ABCC4O15439 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
ABCC4O15439 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC32.42■■■□□ 2.78
ABCC4O15439 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
ABCC4O15439 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
ABCC4O15439 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
ABCC4O15439 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
ABCC4O15439 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ABCC4O15439 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
ABCC4O15439 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
ABCC4O15439 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms