Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SDHDO14521 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.57■■□□□ 1.52
SDHDO14521 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SDHDO14521 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SDHDO14521 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.56■■□□□ 1.52
SDHDO14521 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.56■■□□□ 1.52
SDHDO14521 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SDHDO14521 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SDHDO14521 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
SDHDO14521 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
SDHDO14521 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
SDHDO14521 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.55■■□□□ 1.52
SDHDO14521 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.55■■□□□ 1.52
SDHDO14521 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SDHDO14521 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.54■■□□□ 1.52
SDHDO14521 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
SDHDO14521 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.53■■□□□ 1.52
SDHDO14521 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
SDHDO14521 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.53■■□□□ 1.52
SDHDO14521 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
SDHDO14521 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
SDHDO14521 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SDHDO14521 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
SDHDO14521 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
SDHDO14521 AL449106.1-201ENST00000608517 1980 ntBASIC24.52■■□□□ 1.52
SDHDO14521 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
SDHDO14521 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.51■■□□□ 1.51
SDHDO14521 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SDHDO14521 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
SDHDO14521 AC097358.2-201ENST00000607541 1159 ntBASIC24.51■■□□□ 1.51
SDHDO14521 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SDHDO14521 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
SDHDO14521 AC135731.1-201ENST00000569415 2548 ntBASIC24.5■■□□□ 1.51
SDHDO14521 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.5■■□□□ 1.51
SDHDO14521 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SDHDO14521 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SDHDO14521 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
SDHDO14521 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SDHDO14521 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.48■■□□□ 1.51
SDHDO14521 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.48■■□□□ 1.51
SDHDO14521 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SDHDO14521 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SDHDO14521 AC018358.1-201ENST00000631079 1402 ntBASIC24.47■■□□□ 1.51
SDHDO14521 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.47■■□□□ 1.51
SDHDO14521 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SDHDO14521 MIR762-201ENST00000390236 83 ntBASIC24.46■■□□□ 1.51
SDHDO14521 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SDHDO14521 AC135983.2-203ENST00000454486 1613 ntBASIC24.46■■□□□ 1.51
SDHDO14521 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SDHDO14521 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
SDHDO14521 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SDHDO14521 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
SDHDO14521 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SDHDO14521 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
SDHDO14521 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SDHDO14521 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
SDHDO14521 AC091060.1-201ENST00000623524 1766 ntBASIC24.44■■□□□ 1.5
SDHDO14521 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
SDHDO14521 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
SDHDO14521 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.44■■□□□ 1.5
SDHDO14521 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SDHDO14521 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
SDHDO14521 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SDHDO14521 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SDHDO14521 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC24.42■■□□□ 1.5
SDHDO14521 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.42■■□□□ 1.5
SDHDO14521 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SDHDO14521 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SDHDO14521 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.41■■□□□ 1.5
SDHDO14521 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SDHDO14521 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SDHDO14521 WHAMMP2-203ENST00000563942 1603 ntBASIC24.4■■□□□ 1.5
SDHDO14521 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
SDHDO14521 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SDHDO14521 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SDHDO14521 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SDHDO14521 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.4■■□□□ 1.5
SDHDO14521 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SDHDO14521 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SDHDO14521 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
SDHDO14521 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SDHDO14521 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.39■■□□□ 1.49
SDHDO14521 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SDHDO14521 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SDHDO14521 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.38■■□□□ 1.49
SDHDO14521 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.38■■□□□ 1.49
SDHDO14521 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.38■■□□□ 1.49
SDHDO14521 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.38■■□□□ 1.49
SDHDO14521 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.37■■□□□ 1.49
SDHDO14521 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SDHDO14521 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
SDHDO14521 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SDHDO14521 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SDHDO14521 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.37■■□□□ 1.49
SDHDO14521 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SDHDO14521 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.36■■□□□ 1.49
SDHDO14521 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.36■■□□□ 1.49
SDHDO14521 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SDHDO14521 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
SDHDO14521 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms