Protein–RNA interactions for Protein: O09173

Hgd, Homogentisate 1,2-dioxygenase, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HgdO09173 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
HgdO09173 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HgdO09173 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
HgdO09173 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HgdO09173 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
HgdO09173 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HgdO09173 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.34■■□□□ 1.17
HgdO09173 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
HgdO09173 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
HgdO09173 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
HgdO09173 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.33■■□□□ 1.16
HgdO09173 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.31■■□□□ 1.16
HgdO09173 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.31■■□□□ 1.16
HgdO09173 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HgdO09173 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
HgdO09173 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HgdO09173 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HgdO09173 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HgdO09173 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
HgdO09173 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HgdO09173 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HgdO09173 Gm37136-201ENSMUST00000194368 194 ntBASIC22.27■■□□□ 1.16
HgdO09173 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
HgdO09173 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HgdO09173 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
HgdO09173 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HgdO09173 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
HgdO09173 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
HgdO09173 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
HgdO09173 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
HgdO09173 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
HgdO09173 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HgdO09173 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HgdO09173 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HgdO09173 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
HgdO09173 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HgdO09173 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HgdO09173 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HgdO09173 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HgdO09173 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HgdO09173 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.22■■□□□ 1.15
HgdO09173 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HgdO09173 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
HgdO09173 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
HgdO09173 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
HgdO09173 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HgdO09173 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.2■■□□□ 1.14
HgdO09173 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.2■■□□□ 1.14
HgdO09173 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HgdO09173 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
HgdO09173 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HgdO09173 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HgdO09173 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
HgdO09173 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.17■■□□□ 1.14
HgdO09173 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
HgdO09173 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
HgdO09173 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
HgdO09173 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HgdO09173 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.16■■□□□ 1.14
HgdO09173 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.15■■□□□ 1.14
HgdO09173 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HgdO09173 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.15■■□□□ 1.14
HgdO09173 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HgdO09173 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
HgdO09173 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HgdO09173 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.14■■□□□ 1.13
HgdO09173 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.14■■□□□ 1.13
HgdO09173 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HgdO09173 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
HgdO09173 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HgdO09173 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.12■■□□□ 1.13
HgdO09173 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.12■■□□□ 1.13
HgdO09173 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
HgdO09173 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
HgdO09173 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HgdO09173 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HgdO09173 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HgdO09173 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HgdO09173 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
HgdO09173 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HgdO09173 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HgdO09173 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HgdO09173 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
HgdO09173 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
HgdO09173 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.07■■□□□ 1.12
HgdO09173 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
HgdO09173 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HgdO09173 Gm4799-201ENSMUST00000095396 657 ntBASIC22.07■■□□□ 1.12
HgdO09173 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
HgdO09173 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
HgdO09173 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.06■■□□□ 1.12
HgdO09173 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
HgdO09173 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
HgdO09173 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
HgdO09173 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
HgdO09173 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HgdO09173 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
HgdO09173 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HgdO09173 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
HgdO09173 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms