Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.46■□□□□ 0.87
SRRM4A7MD48 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRRM4A7MD48 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
SRRM4A7MD48 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SRRM4A7MD48 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SRRM4A7MD48 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.45■□□□□ 0.86
SRRM4A7MD48 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.45■□□□□ 0.86
SRRM4A7MD48 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRRM4A7MD48 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SRRM4A7MD48 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRRM4A7MD48 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRRM4A7MD48 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRRM4A7MD48 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SRRM4A7MD48 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.44■□□□□ 0.86
SRRM4A7MD48 AC044849.2-201ENST00000606596 710 ntBASIC20.43■□□□□ 0.86
SRRM4A7MD48 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SRRM4A7MD48 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SRRM4A7MD48 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SRRM4A7MD48 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SRRM4A7MD48 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.42■□□□□ 0.86
SRRM4A7MD48 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SRRM4A7MD48 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM4A7MD48 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM4A7MD48 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM4A7MD48 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.41■□□□□ 0.86
SRRM4A7MD48 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SRRM4A7MD48 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SRRM4A7MD48 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SRRM4A7MD48 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.4■□□□□ 0.86
SRRM4A7MD48 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.4■□□□□ 0.86
SRRM4A7MD48 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SRRM4A7MD48 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SRRM4A7MD48 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SRRM4A7MD48 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SRRM4A7MD48 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.39■□□□□ 0.86
SRRM4A7MD48 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.39■□□□□ 0.85
SRRM4A7MD48 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM4A7MD48 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM4A7MD48 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SRRM4A7MD48 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SRRM4A7MD48 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM4A7MD48 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.38■□□□□ 0.85
SRRM4A7MD48 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SRRM4A7MD48 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SRRM4A7MD48 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRRM4A7MD48 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.37■□□□□ 0.85
SRRM4A7MD48 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SRRM4A7MD48 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.37■□□□□ 0.85
SRRM4A7MD48 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.37■□□□□ 0.85
SRRM4A7MD48 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SRRM4A7MD48 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SRRM4A7MD48 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SRRM4A7MD48 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SRRM4A7MD48 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRRM4A7MD48 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRRM4A7MD48 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.35■□□□□ 0.85
SRRM4A7MD48 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.35■□□□□ 0.85
SRRM4A7MD48 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRRM4A7MD48 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SRRM4A7MD48 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SRRM4A7MD48 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRRM4A7MD48 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.34■□□□□ 0.85
SRRM4A7MD48 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.34■□□□□ 0.85
SRRM4A7MD48 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SRRM4A7MD48 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM4A7MD48 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM4A7MD48 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SRRM4A7MD48 AC021231.2-201ENST00000594613 730 ntBASIC20.33■□□□□ 0.85
SRRM4A7MD48 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM4A7MD48 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM4A7MD48 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM4A7MD48 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM4A7MD48 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM4A7MD48 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRRM4A7MD48 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SRRM4A7MD48 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRRM4A7MD48 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.32■□□□□ 0.84
SRRM4A7MD48 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SRRM4A7MD48 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRRM4A7MD48 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM4A7MD48 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM4A7MD48 AC018358.1-201ENST00000631079 1402 ntBASIC20.31■□□□□ 0.84
SRRM4A7MD48 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM4A7MD48 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM4A7MD48 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SRRM4A7MD48 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SRRM4A7MD48 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM4A7MD48 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRRM4A7MD48 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM4A7MD48 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM4A7MD48 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRRM4A7MD48 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SRRM4A7MD48 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.29■□□□□ 0.84
SRRM4A7MD48 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRRM4A7MD48 RPS2P35-201ENST00000443417 897 ntBASIC20.29■□□□□ 0.84
SRRM4A7MD48 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.29■□□□□ 0.84
SRRM4A7MD48 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SRRM4A7MD48 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM4A7MD48 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRRM4A7MD48 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms