Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.7■□□□□ 0.9
DUXBA0A1W2PPF3 AC091060.1-201ENST00000623524 1766 ntBASIC20.69■□□□□ 0.9
DUXBA0A1W2PPF3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DUXBA0A1W2PPF3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DUXBA0A1W2PPF3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
DUXBA0A1W2PPF3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DUXBA0A1W2PPF3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
DUXBA0A1W2PPF3 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.68■□□□□ 0.9
DUXBA0A1W2PPF3 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DUXBA0A1W2PPF3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DUXBA0A1W2PPF3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DUXBA0A1W2PPF3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
DUXBA0A1W2PPF3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DUXBA0A1W2PPF3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
DUXBA0A1W2PPF3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
DUXBA0A1W2PPF3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DUXBA0A1W2PPF3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
DUXBA0A1W2PPF3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
DUXBA0A1W2PPF3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
DUXBA0A1W2PPF3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
DUXBA0A1W2PPF3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DUXBA0A1W2PPF3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
DUXBA0A1W2PPF3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
DUXBA0A1W2PPF3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
DUXBA0A1W2PPF3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DUXBA0A1W2PPF3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
DUXBA0A1W2PPF3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
DUXBA0A1W2PPF3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
DUXBA0A1W2PPF3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
DUXBA0A1W2PPF3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DUXBA0A1W2PPF3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
DUXBA0A1W2PPF3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.64■□□□□ 0.89
DUXBA0A1W2PPF3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
DUXBA0A1W2PPF3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DUXBA0A1W2PPF3 AC145676.1-201ENST00000514988 2004 ntBASIC20.63■□□□□ 0.89
DUXBA0A1W2PPF3 AC018358.1-201ENST00000631079 1402 ntBASIC20.63■□□□□ 0.89
DUXBA0A1W2PPF3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
DUXBA0A1W2PPF3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.63■□□□□ 0.89
DUXBA0A1W2PPF3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
DUXBA0A1W2PPF3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
DUXBA0A1W2PPF3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.63■□□□□ 0.89
DUXBA0A1W2PPF3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.63■□□□□ 0.89
DUXBA0A1W2PPF3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.62■□□□□ 0.89
DUXBA0A1W2PPF3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DUXBA0A1W2PPF3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.62■□□□□ 0.89
DUXBA0A1W2PPF3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
DUXBA0A1W2PPF3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
DUXBA0A1W2PPF3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
DUXBA0A1W2PPF3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
DUXBA0A1W2PPF3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.6■□□□□ 0.89
DUXBA0A1W2PPF3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
DUXBA0A1W2PPF3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
DUXBA0A1W2PPF3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
DUXBA0A1W2PPF3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
DUXBA0A1W2PPF3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.59■□□□□ 0.89
DUXBA0A1W2PPF3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.58■□□□□ 0.89
DUXBA0A1W2PPF3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DUXBA0A1W2PPF3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
DUXBA0A1W2PPF3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
DUXBA0A1W2PPF3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
DUXBA0A1W2PPF3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DUXBA0A1W2PPF3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DUXBA0A1W2PPF3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
DUXBA0A1W2PPF3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DUXBA0A1W2PPF3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DUXBA0A1W2PPF3 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DUXBA0A1W2PPF3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.56■□□□□ 0.88
DUXBA0A1W2PPF3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DUXBA0A1W2PPF3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DUXBA0A1W2PPF3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.56■□□□□ 0.88
DUXBA0A1W2PPF3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.55■□□□□ 0.88
DUXBA0A1W2PPF3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.55■□□□□ 0.88
DUXBA0A1W2PPF3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUXBA0A1W2PPF3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC20.55■□□□□ 0.88
DUXBA0A1W2PPF3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUXBA0A1W2PPF3 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DUXBA0A1W2PPF3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DUXBA0A1W2PPF3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DUXBA0A1W2PPF3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
DUXBA0A1W2PPF3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.54■□□□□ 0.88
DUXBA0A1W2PPF3 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
DUXBA0A1W2PPF3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DUXBA0A1W2PPF3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.53■□□□□ 0.88
DUXBA0A1W2PPF3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DUXBA0A1W2PPF3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.53■□□□□ 0.88
DUXBA0A1W2PPF3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DUXBA0A1W2PPF3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
DUXBA0A1W2PPF3 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DUXBA0A1W2PPF3 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.52■□□□□ 0.88
DUXBA0A1W2PPF3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
DUXBA0A1W2PPF3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DUXBA0A1W2PPF3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.51■□□□□ 0.87
DUXBA0A1W2PPF3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC20.51■□□□□ 0.87
DUXBA0A1W2PPF3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DUXBA0A1W2PPF3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DUXBA0A1W2PPF3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
DUXBA0A1W2PPF3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DUXBA0A1W2PPF3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.5■□□□□ 0.87
DUXBA0A1W2PPF3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.5■□□□□ 0.87
DUXBA0A1W2PPF3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms