Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv3-9A0A140T8P4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv3-9A0A140T8P4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv3-9A0A140T8P4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Igkv3-9A0A140T8P4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv3-9A0A140T8P4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Igkv3-9A0A140T8P4 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv3-9A0A140T8P4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv3-9A0A140T8P4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv3-9A0A140T8P4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv3-9A0A140T8P4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Igkv3-9A0A140T8P4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC16.1■□□□□ 0.17
Igkv3-9A0A140T8P4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Igkv3-9A0A140T8P4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Igkv3-9A0A140T8P4 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.09■□□□□ 0.17
Igkv3-9A0A140T8P4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv3-9A0A140T8P4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv3-9A0A140T8P4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Igkv3-9A0A140T8P4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Igkv3-9A0A140T8P4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Igkv3-9A0A140T8P4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Igkv3-9A0A140T8P4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.08■□□□□ 0.16
Igkv3-9A0A140T8P4 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv3-9A0A140T8P4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv3-9A0A140T8P4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv3-9A0A140T8P4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC16.08■□□□□ 0.16
Igkv3-9A0A140T8P4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv3-9A0A140T8P4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv3-9A0A140T8P4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Igkv3-9A0A140T8P4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Igkv3-9A0A140T8P4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv3-9A0A140T8P4 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv3-9A0A140T8P4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv3-9A0A140T8P4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv3-9A0A140T8P4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC16.07■□□□□ 0.16
Igkv3-9A0A140T8P4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv3-9A0A140T8P4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv3-9A0A140T8P4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Igkv3-9A0A140T8P4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv3-9A0A140T8P4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv3-9A0A140T8P4 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv3-9A0A140T8P4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv3-9A0A140T8P4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Igkv3-9A0A140T8P4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Igkv3-9A0A140T8P4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv3-9A0A140T8P4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Igkv3-9A0A140T8P4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv3-9A0A140T8P4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Igkv3-9A0A140T8P4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Igkv3-9A0A140T8P4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.04■□□□□ 0.16
Igkv3-9A0A140T8P4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Igkv3-9A0A140T8P4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Igkv3-9A0A140T8P4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Igkv3-9A0A140T8P4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Igkv3-9A0A140T8P4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv3-9A0A140T8P4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv3-9A0A140T8P4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.02■□□□□ 0.16
Igkv3-9A0A140T8P4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Igkv3-9A0A140T8P4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Igkv3-9A0A140T8P4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Igkv3-9A0A140T8P4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv3-9A0A140T8P4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.01■□□□□ 0.15
Igkv3-9A0A140T8P4 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv3-9A0A140T8P4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Igkv3-9A0A140T8P4 Gm37847-201ENSMUST00000192163 1497 ntBASIC16■□□□□ 0.15
Igkv3-9A0A140T8P4 Gm31748-201ENSMUST00000194938 1497 ntBASIC16■□□□□ 0.15
Igkv3-9A0A140T8P4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16■□□□□ 0.15
Igkv3-9A0A140T8P4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv3-9A0A140T8P4 Nkain2-201ENSMUST00000092602 558 ntBASIC16■□□□□ 0.15
Igkv3-9A0A140T8P4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Igkv3-9A0A140T8P4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Igkv3-9A0A140T8P4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16■□□□□ 0.15
Igkv3-9A0A140T8P4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv3-9A0A140T8P4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16■□□□□ 0.15
Igkv3-9A0A140T8P4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Igkv3-9A0A140T8P4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv3-9A0A140T8P4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv3-9A0A140T8P4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Igkv3-9A0A140T8P4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv3-9A0A140T8P4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Igkv3-9A0A140T8P4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv3-9A0A140T8P4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv3-9A0A140T8P4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv3-9A0A140T8P4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Igkv3-9A0A140T8P4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv3-9A0A140T8P4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.97■□□□□ 0.15
Igkv3-9A0A140T8P4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv3-9A0A140T8P4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv3-9A0A140T8P4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.97■□□□□ 0.15
Igkv3-9A0A140T8P4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv3-9A0A140T8P4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
Igkv3-9A0A140T8P4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC15.96■□□□□ 0.15
Igkv3-9A0A140T8P4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.96■□□□□ 0.15
Igkv3-9A0A140T8P4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.96■□□□□ 0.15
Igkv3-9A0A140T8P4 Particl-201ENSMUST00000205370 1560 ntBASIC15.96■□□□□ 0.14
Igkv3-9A0A140T8P4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv3-9A0A140T8P4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv3-9A0A140T8P4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Igkv3-9A0A140T8P4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Igkv3-9A0A140T8P4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms