Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Particl-201ENSMUST00000205370 1560 ntBASIC16.12■□□□□ 0.17
Trbv13-2A0A140T8N6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.12■□□□□ 0.17
Trbv13-2A0A140T8N6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Trbv13-2A0A140T8N6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trbv13-2A0A140T8N6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv13-2A0A140T8N6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv13-2A0A140T8N6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv13-2A0A140T8N6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trbv13-2A0A140T8N6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC16.11■□□□□ 0.17
Trbv13-2A0A140T8N6 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Trbv13-2A0A140T8N6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trbv13-2A0A140T8N6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv13-2A0A140T8N6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbv13-2A0A140T8N6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv13-2A0A140T8N6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv13-2A0A140T8N6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv13-2A0A140T8N6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv13-2A0A140T8N6 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv13-2A0A140T8N6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv13-2A0A140T8N6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trbv13-2A0A140T8N6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv13-2A0A140T8N6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv13-2A0A140T8N6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv13-2A0A140T8N6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trbv13-2A0A140T8N6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trbv13-2A0A140T8N6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv13-2A0A140T8N6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv13-2A0A140T8N6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trbv13-2A0A140T8N6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv13-2A0A140T8N6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv13-2A0A140T8N6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv13-2A0A140T8N6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trbv13-2A0A140T8N6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv13-2A0A140T8N6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv13-2A0A140T8N6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv13-2A0A140T8N6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv13-2A0A140T8N6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv13-2A0A140T8N6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv13-2A0A140T8N6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv13-2A0A140T8N6 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbv13-2A0A140T8N6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trbv13-2A0A140T8N6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbv13-2A0A140T8N6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv13-2A0A140T8N6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC16.02■□□□□ 0.16
Trbv13-2A0A140T8N6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbv13-2A0A140T8N6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
Trbv13-2A0A140T8N6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbv13-2A0A140T8N6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv13-2A0A140T8N6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv13-2A0A140T8N6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv13-2A0A140T8N6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbv13-2A0A140T8N6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trbv13-2A0A140T8N6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trbv13-2A0A140T8N6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbv13-2A0A140T8N6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16■□□□□ 0.15
Trbv13-2A0A140T8N6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16■□□□□ 0.15
Trbv13-2A0A140T8N6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
Trbv13-2A0A140T8N6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trbv13-2A0A140T8N6 Gm37136-201ENSMUST00000194368 194 ntBASIC15.99■□□□□ 0.15
Trbv13-2A0A140T8N6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC15.99■□□□□ 0.15
Trbv13-2A0A140T8N6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbv13-2A0A140T8N6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv13-2A0A140T8N6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Trbv13-2A0A140T8N6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv13-2A0A140T8N6 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv13-2A0A140T8N6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv13-2A0A140T8N6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv13-2A0A140T8N6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.98■□□□□ 0.15
Trbv13-2A0A140T8N6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trbv13-2A0A140T8N6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv13-2A0A140T8N6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv13-2A0A140T8N6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv13-2A0A140T8N6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv13-2A0A140T8N6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC15.97■□□□□ 0.15
Trbv13-2A0A140T8N6 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.97■□□□□ 0.15
Trbv13-2A0A140T8N6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trbv13-2A0A140T8N6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-2A0A140T8N6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-2A0A140T8N6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-2A0A140T8N6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-2A0A140T8N6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-2A0A140T8N6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-2A0A140T8N6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-2A0A140T8N6 Gm7432-201ENSMUST00000210343 879 ntBASIC15.95■□□□□ 0.14
Trbv13-2A0A140T8N6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-2A0A140T8N6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Trbv13-2A0A140T8N6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-2A0A140T8N6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Trbv13-2A0A140T8N6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-2A0A140T8N6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-2A0A140T8N6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-2A0A140T8N6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-2A0A140T8N6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-2A0A140T8N6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-2A0A140T8N6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trbv13-2A0A140T8N6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-2A0A140T8N6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Trbv13-2A0A140T8N6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv13-2A0A140T8N6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv13-2A0A140T8N6 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 100.2 ms