Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.62□□□□□ -0.07
Igkv3-5A0A140T8M6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Igkv3-5A0A140T8M6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv3-5A0A140T8M6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv3-5A0A140T8M6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.61□□□□□ -0.07
Igkv3-5A0A140T8M6 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.61□□□□□ -0.07
Igkv3-5A0A140T8M6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv3-5A0A140T8M6 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv3-5A0A140T8M6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Igkv3-5A0A140T8M6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Igkv3-5A0A140T8M6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv3-5A0A140T8M6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv3-5A0A140T8M6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Igkv3-5A0A140T8M6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Igkv3-5A0A140T8M6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-5A0A140T8M6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-5A0A140T8M6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-5A0A140T8M6 Pcf11-205ENSMUST00000208255 1720 ntBASIC14.59□□□□□ -0.07
Igkv3-5A0A140T8M6 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.59□□□□□ -0.07
Igkv3-5A0A140T8M6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-5A0A140T8M6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-5A0A140T8M6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Igkv3-5A0A140T8M6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Igkv3-5A0A140T8M6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC14.58□□□□□ -0.08
Igkv3-5A0A140T8M6 Zfp131-205ENSMUST00000223812 663 ntBASIC14.58□□□□□ -0.08
Igkv3-5A0A140T8M6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv3-5A0A140T8M6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv3-5A0A140T8M6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Igkv3-5A0A140T8M6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Igkv3-5A0A140T8M6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Igkv3-5A0A140T8M6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Igkv3-5A0A140T8M6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-5A0A140T8M6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-5A0A140T8M6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-5A0A140T8M6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.57□□□□□ -0.08
Igkv3-5A0A140T8M6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-5A0A140T8M6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-5A0A140T8M6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-5A0A140T8M6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Igkv3-5A0A140T8M6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Igkv3-5A0A140T8M6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-5A0A140T8M6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-5A0A140T8M6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-5A0A140T8M6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC14.56□□□□□ -0.08
Igkv3-5A0A140T8M6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.56□□□□□ -0.08
Igkv3-5A0A140T8M6 Tdp2-203ENSMUST00000223804 1136 ntBASIC14.56□□□□□ -0.08
Igkv3-5A0A140T8M6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Igkv3-5A0A140T8M6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Igkv3-5A0A140T8M6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Igkv3-5A0A140T8M6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Igkv3-5A0A140T8M6 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC14.55□□□□□ -0.08
Igkv3-5A0A140T8M6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv3-5A0A140T8M6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv3-5A0A140T8M6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Igkv3-5A0A140T8M6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.54□□□□□ -0.08
Igkv3-5A0A140T8M6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv3-5A0A140T8M6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC14.54□□□□□ -0.08
Igkv3-5A0A140T8M6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv3-5A0A140T8M6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv3-5A0A140T8M6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Igkv3-5A0A140T8M6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv3-5A0A140T8M6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Igkv3-5A0A140T8M6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC14.53□□□□□ -0.08
Igkv3-5A0A140T8M6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Igkv3-5A0A140T8M6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Igkv3-5A0A140T8M6 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.52□□□□□ -0.09
Igkv3-5A0A140T8M6 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Igkv3-5A0A140T8M6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Igkv3-5A0A140T8M6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Igkv3-5A0A140T8M6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-5A0A140T8M6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Igkv3-5A0A140T8M6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-5A0A140T8M6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.51□□□□□ -0.09
Igkv3-5A0A140T8M6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC14.51□□□□□ -0.09
Igkv3-5A0A140T8M6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-5A0A140T8M6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-5A0A140T8M6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Igkv3-5A0A140T8M6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Igkv3-5A0A140T8M6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Igkv3-5A0A140T8M6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Igkv3-5A0A140T8M6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.49□□□□□ -0.09
Igkv3-5A0A140T8M6 Gm9397-201ENSMUST00000200125 605 ntBASIC14.49□□□□□ -0.09
Igkv3-5A0A140T8M6 Gm45855-201ENSMUST00000212546 880 ntBASIC14.49□□□□□ -0.09
Igkv3-5A0A140T8M6 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv3-5A0A140T8M6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Igkv3-5A0A140T8M6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv3-5A0A140T8M6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv3-5A0A140T8M6 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Igkv3-5A0A140T8M6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC14.48□□□□□ -0.09
Igkv3-5A0A140T8M6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Igkv3-5A0A140T8M6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv3-5A0A140T8M6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Igkv3-5A0A140T8M6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv3-5A0A140T8M6 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv3-5A0A140T8M6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Igkv3-5A0A140T8M6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC14.47□□□□□ -0.09
Igkv3-5A0A140T8M6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv3-5A0A140T8M6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Igkv3-5A0A140T8M6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Igkv3-5A0A140T8M6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms