Protein–RNA interactions for Protein: A0A140T8M0

Igkv1-117, Immunoglobulin kappa variable 1-117 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-117A0A140T8M0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv1-117A0A140T8M0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv1-117A0A140T8M0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv1-117A0A140T8M0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Igkv1-117A0A140T8M0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv1-117A0A140T8M0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Igkv1-117A0A140T8M0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv1-117A0A140T8M0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Igkv1-117A0A140T8M0 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv1-117A0A140T8M0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv1-117A0A140T8M0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv1-117A0A140T8M0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Igkv1-117A0A140T8M0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv1-117A0A140T8M0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv1-117A0A140T8M0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv1-117A0A140T8M0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv1-117A0A140T8M0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Igkv1-117A0A140T8M0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.34■□□□□ 0.05
Igkv1-117A0A140T8M0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Igkv1-117A0A140T8M0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Igkv1-117A0A140T8M0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Igkv1-117A0A140T8M0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Igkv1-117A0A140T8M0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Igkv1-117A0A140T8M0 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Igkv1-117A0A140T8M0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Igkv1-117A0A140T8M0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Igkv1-117A0A140T8M0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Igkv1-117A0A140T8M0 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Igkv1-117A0A140T8M0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Igkv1-117A0A140T8M0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Igkv1-117A0A140T8M0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv1-117A0A140T8M0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv1-117A0A140T8M0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.32■□□□□ 0.04
Igkv1-117A0A140T8M0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv1-117A0A140T8M0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv1-117A0A140T8M0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv1-117A0A140T8M0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Igkv1-117A0A140T8M0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.32■□□□□ 0.04
Igkv1-117A0A140T8M0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Igkv1-117A0A140T8M0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Igkv1-117A0A140T8M0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv1-117A0A140T8M0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv1-117A0A140T8M0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Igkv1-117A0A140T8M0 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Igkv1-117A0A140T8M0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Igkv1-117A0A140T8M0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Igkv1-117A0A140T8M0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Igkv1-117A0A140T8M0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Igkv1-117A0A140T8M0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv1-117A0A140T8M0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Igkv1-117A0A140T8M0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv1-117A0A140T8M0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Igkv1-117A0A140T8M0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv1-117A0A140T8M0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv1-117A0A140T8M0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Igkv1-117A0A140T8M0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv1-117A0A140T8M0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv1-117A0A140T8M0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv1-117A0A140T8M0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv1-117A0A140T8M0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv1-117A0A140T8M0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv1-117A0A140T8M0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.29■□□□□ 0.04
Igkv1-117A0A140T8M0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv1-117A0A140T8M0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv1-117A0A140T8M0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Igkv1-117A0A140T8M0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv1-117A0A140T8M0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv1-117A0A140T8M0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv1-117A0A140T8M0 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv1-117A0A140T8M0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv1-117A0A140T8M0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv1-117A0A140T8M0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv1-117A0A140T8M0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv1-117A0A140T8M0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Igkv1-117A0A140T8M0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igkv1-117A0A140T8M0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.27■□□□□ 0.04
Igkv1-117A0A140T8M0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igkv1-117A0A140T8M0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igkv1-117A0A140T8M0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Igkv1-117A0A140T8M0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC15.27■□□□□ 0.03
Igkv1-117A0A140T8M0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.27■□□□□ 0.03
Igkv1-117A0A140T8M0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Igkv1-117A0A140T8M0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Igkv1-117A0A140T8M0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Igkv1-117A0A140T8M0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Igkv1-117A0A140T8M0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Igkv1-117A0A140T8M0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Igkv1-117A0A140T8M0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv1-117A0A140T8M0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv1-117A0A140T8M0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv1-117A0A140T8M0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Igkv1-117A0A140T8M0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Igkv1-117A0A140T8M0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Igkv1-117A0A140T8M0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.25■□□□□ 0.03
Igkv1-117A0A140T8M0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv1-117A0A140T8M0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Igkv1-117A0A140T8M0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Igkv1-117A0A140T8M0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv1-117A0A140T8M0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Igkv1-117A0A140T8M0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms