Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.02■□□□□ 0.32
Trdv2-1A0A0G2JGB9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trdv2-1A0A0G2JGB9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.02■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC17■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Gm6277-202ENSMUST00000224036 2779 ntBASIC17■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC16.97■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trdv2-1A0A0G2JGB9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.96■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trdv2-1A0A0G2JGB9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trdv2-1A0A0G2JGB9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trdv2-1A0A0G2JGB9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trdv2-1A0A0G2JGB9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC16.92■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trdv2-1A0A0G2JGB9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trdv2-1A0A0G2JGB9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdv2-1A0A0G2JGB9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC16.88■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdv2-1A0A0G2JGB9 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC16.85■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trdv2-1A0A0G2JGB9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms