Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.82■□□□□ 0.12
Trav9d-4A0A0G2JG37 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-4A0A0G2JG37 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-4A0A0G2JG37 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav9d-4A0A0G2JG37 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trav9d-4A0A0G2JG37 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trav9d-4A0A0G2JG37 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-4A0A0G2JG37 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-4A0A0G2JG37 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav9d-4A0A0G2JG37 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-4A0A0G2JG37 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-4A0A0G2JG37 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-4A0A0G2JG37 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav9d-4A0A0G2JG37 Gm24804-201ENSMUST00000174982 85 ntBASIC15.8■□□□□ 0.12
Trav9d-4A0A0G2JG37 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-4A0A0G2JG37 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-4A0A0G2JG37 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav9d-4A0A0G2JG37 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-4A0A0G2JG37 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-4A0A0G2JG37 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav9d-4A0A0G2JG37 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-4A0A0G2JG37 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-4A0A0G2JG37 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-4A0A0G2JG37 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-4A0A0G2JG37 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-4A0A0G2JG37 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-4A0A0G2JG37 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-4A0A0G2JG37 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav9d-4A0A0G2JG37 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-4A0A0G2JG37 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-4A0A0G2JG37 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-4A0A0G2JG37 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav9d-4A0A0G2JG37 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-4A0A0G2JG37 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav9d-4A0A0G2JG37 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9d-4A0A0G2JG37 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trav9d-4A0A0G2JG37 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav9d-4A0A0G2JG37 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9d-4A0A0G2JG37 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav9d-4A0A0G2JG37 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-4A0A0G2JG37 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-4A0A0G2JG37 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-4A0A0G2JG37 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-4A0A0G2JG37 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trav9d-4A0A0G2JG37 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav9d-4A0A0G2JG37 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trav9d-4A0A0G2JG37 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav9d-4A0A0G2JG37 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav9d-4A0A0G2JG37 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trav9d-4A0A0G2JG37 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-4A0A0G2JG37 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav9d-4A0A0G2JG37 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-4A0A0G2JG37 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-4A0A0G2JG37 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-4A0A0G2JG37 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-4A0A0G2JG37 Gm16148-201ENSMUST00000119653 893 ntBASIC15.74■□□□□ 0.11
Trav9d-4A0A0G2JG37 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trav9d-4A0A0G2JG37 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav9d-4A0A0G2JG37 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-4A0A0G2JG37 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav9d-4A0A0G2JG37 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav9d-4A0A0G2JG37 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trav9d-4A0A0G2JG37 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-4A0A0G2JG37 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav9d-4A0A0G2JG37 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav9d-4A0A0G2JG37 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-4A0A0G2JG37 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-4A0A0G2JG37 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-4A0A0G2JG37 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-4A0A0G2JG37 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Trav9d-4A0A0G2JG37 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-4A0A0G2JG37 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-4A0A0G2JG37 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-4A0A0G2JG37 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-4A0A0G2JG37 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-4A0A0G2JG37 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Trav9d-4A0A0G2JG37 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav9d-4A0A0G2JG37 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.71■□□□□ 0.1
Trav9d-4A0A0G2JG37 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-4A0A0G2JG37 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav9d-4A0A0G2JG37 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-4A0A0G2JG37 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-4A0A0G2JG37 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-4A0A0G2JG37 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-4A0A0G2JG37 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-4A0A0G2JG37 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-4A0A0G2JG37 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav9d-4A0A0G2JG37 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav9d-4A0A0G2JG37 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav9d-4A0A0G2JG37 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9d-4A0A0G2JG37 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9d-4A0A0G2JG37 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav9d-4A0A0G2JG37 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms