Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trav3n-3A0A0G2JEM0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.42■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Gm24804-201ENSMUST00000174982 85 ntBASIC17.41■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Notumos-201ENSMUST00000151998 2659 ntBASIC17.4■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trav3n-3A0A0G2JEM0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Gm16148-201ENSMUST00000119653 893 ntBASIC17.39■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav3n-3A0A0G2JEM0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trav3n-3A0A0G2JEM0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.37■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav3n-3A0A0G2JEM0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.36■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3n-3A0A0G2JEM0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3n-3A0A0G2JEM0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav3n-3A0A0G2JEM0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.32■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.3■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav3n-3A0A0G2JEM0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms