Protein–RNA interactions for Protein: A0A0G2JDF5

Trav14n-2, T cell receptor alpha variable 14D-2 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-2A0A0G2JDF5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17.04■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trav14n-2A0A0G2JDF5 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.03■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Peli2-204ENSMUST00000226513 1320 ntBASIC17.02■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.02■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav14n-2A0A0G2JDF5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav14n-2A0A0G2JDF5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.99■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14n-2A0A0G2JDF5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14n-2A0A0G2JDF5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC16.97■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Trav14n-2A0A0G2JDF5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC16.96■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav14n-2A0A0G2JDF5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.95■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trav14n-2A0A0G2JDF5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.95■□□□□ 0.3
Trav14n-2A0A0G2JDF5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav14n-2A0A0G2JDF5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav14n-2A0A0G2JDF5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav14n-2A0A0G2JDF5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.88■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav14n-2A0A0G2JDF5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav14n-2A0A0G2JDF5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav14n-2A0A0G2JDF5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms