Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV22A0A0B4J277 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV22A0A0B4J277 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV22A0A0B4J277 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV22A0A0B4J277 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV22A0A0B4J277 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV22A0A0B4J277 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV22A0A0B4J277 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV22A0A0B4J277 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV22A0A0B4J277 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV22A0A0B4J277 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV22A0A0B4J277 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV22A0A0B4J277 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV22A0A0B4J277 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV22A0A0B4J277 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV22A0A0B4J277 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV22A0A0B4J277 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV22A0A0B4J277 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV22A0A0B4J277 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV22A0A0B4J277 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV22A0A0B4J277 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV22A0A0B4J277 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV22A0A0B4J277 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV22A0A0B4J277 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV22A0A0B4J277 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV22A0A0B4J277 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV22A0A0B4J277 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV22A0A0B4J277 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV22A0A0B4J277 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV22A0A0B4J277 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV22A0A0B4J277 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV22A0A0B4J277 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV22A0A0B4J277 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV22A0A0B4J277 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV22A0A0B4J277 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TRAV22A0A0B4J277 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TRAV22A0A0B4J277 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV22A0A0B4J277 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRAV22A0A0B4J277 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV22A0A0B4J277 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV22A0A0B4J277 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV22A0A0B4J277 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV22A0A0B4J277 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV22A0A0B4J277 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV22A0A0B4J277 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV22A0A0B4J277 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC14.33□□□□□ -0.11
TRAV22A0A0B4J277 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV22A0A0B4J277 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV22A0A0B4J277 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV22A0A0B4J277 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV22A0A0B4J277 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV22A0A0B4J277 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV22A0A0B4J277 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV22A0A0B4J277 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV22A0A0B4J277 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV22A0A0B4J277 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV22A0A0B4J277 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV22A0A0B4J277 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV22A0A0B4J277 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV22A0A0B4J277 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV22A0A0B4J277 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV22A0A0B4J277 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV22A0A0B4J277 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV22A0A0B4J277 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV22A0A0B4J277 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV22A0A0B4J277 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV22A0A0B4J277 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV22A0A0B4J277 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV22A0A0B4J277 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV22A0A0B4J277 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV22A0A0B4J277 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV22A0A0B4J277 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV22A0A0B4J277 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 AC091060.1-201ENST00000623524 1766 ntBASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
TRAV22A0A0B4J277 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV22A0A0B4J277 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV22A0A0B4J277 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV22A0A0B4J277 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV22A0A0B4J277 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV22A0A0B4J277 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV22A0A0B4J277 LINC00543-201ENST00000567234 1845 ntBASIC14.29□□□□□ -0.12
TRAV22A0A0B4J277 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV22A0A0B4J277 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV22A0A0B4J277 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV22A0A0B4J277 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV22A0A0B4J277 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV22A0A0B4J277 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV22A0A0B4J277 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV22A0A0B4J277 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV22A0A0B4J277 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms