Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC135731.1-201ENST00000569415 2548 ntBASIC17.54■□□□□ 0.4
TRAV13-1A0A0B4J241 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV13-1A0A0B4J241 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV13-1A0A0B4J241 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAV13-1A0A0B4J241 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
TRAV13-1A0A0B4J241 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRAV13-1A0A0B4J241 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.53■□□□□ 0.4
TRAV13-1A0A0B4J241 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV13-1A0A0B4J241 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
TRAV13-1A0A0B4J241 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRAV13-1A0A0B4J241 LINC01003-201ENST00000564834 1764 ntBASIC17.51■□□□□ 0.39
TRAV13-1A0A0B4J241 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV13-1A0A0B4J241 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TRAV13-1A0A0B4J241 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
TRAV13-1A0A0B4J241 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV13-1A0A0B4J241 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRAV13-1A0A0B4J241 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV13-1A0A0B4J241 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.5■□□□□ 0.39
TRAV13-1A0A0B4J241 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV13-1A0A0B4J241 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV13-1A0A0B4J241 EBPL-202ENST00000378268 680 ntTSL 3 BASIC17.49■□□□□ 0.39
TRAV13-1A0A0B4J241 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV13-1A0A0B4J241 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV13-1A0A0B4J241 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV13-1A0A0B4J241 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.49■□□□□ 0.39
TRAV13-1A0A0B4J241 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV13-1A0A0B4J241 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV13-1A0A0B4J241 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV13-1A0A0B4J241 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV13-1A0A0B4J241 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV13-1A0A0B4J241 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV13-1A0A0B4J241 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV13-1A0A0B4J241 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV13-1A0A0B4J241 AC100797.4-201ENST00000631653 1827 ntBASIC17.47■□□□□ 0.39
TRAV13-1A0A0B4J241 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV13-1A0A0B4J241 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV13-1A0A0B4J241 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV13-1A0A0B4J241 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV13-1A0A0B4J241 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV13-1A0A0B4J241 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
TRAV13-1A0A0B4J241 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.46■□□□□ 0.39
TRAV13-1A0A0B4J241 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC17.46■□□□□ 0.39
TRAV13-1A0A0B4J241 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TRAV13-1A0A0B4J241 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV13-1A0A0B4J241 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV13-1A0A0B4J241 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV13-1A0A0B4J241 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV13-1A0A0B4J241 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TRAV13-1A0A0B4J241 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV13-1A0A0B4J241 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV13-1A0A0B4J241 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV13-1A0A0B4J241 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV13-1A0A0B4J241 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV13-1A0A0B4J241 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRAV13-1A0A0B4J241 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV13-1A0A0B4J241 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV13-1A0A0B4J241 AL391121.1-201ENST00000607967 1349 ntBASIC17.43■□□□□ 0.38
TRAV13-1A0A0B4J241 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TRAV13-1A0A0B4J241 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV13-1A0A0B4J241 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.41■□□□□ 0.38
TRAV13-1A0A0B4J241 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV13-1A0A0B4J241 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV13-1A0A0B4J241 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV13-1A0A0B4J241 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV13-1A0A0B4J241 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV13-1A0A0B4J241 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV13-1A0A0B4J241 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV13-1A0A0B4J241 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV13-1A0A0B4J241 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV13-1A0A0B4J241 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV13-1A0A0B4J241 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV13-1A0A0B4J241 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV13-1A0A0B4J241 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV13-1A0A0B4J241 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TRAV13-1A0A0B4J241 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV13-1A0A0B4J241 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV13-1A0A0B4J241 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV13-1A0A0B4J241 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV13-1A0A0B4J241 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV13-1A0A0B4J241 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV13-1A0A0B4J241 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
TRAV13-1A0A0B4J241 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TRAV13-1A0A0B4J241 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV13-1A0A0B4J241 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV13-1A0A0B4J241 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV13-1A0A0B4J241 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV13-1A0A0B4J241 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV13-1A0A0B4J241 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV13-1A0A0B4J241 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV13-1A0A0B4J241 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TRAV13-1A0A0B4J241 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV13-1A0A0B4J241 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV13-1A0A0B4J241 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV13-1A0A0B4J241 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV13-1A0A0B4J241 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV13-1A0A0B4J241 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV13-1A0A0B4J241 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV13-1A0A0B4J241 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV13-1A0A0B4J241 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV13-1A0A0B4J241 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms