Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.47■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tcrg-V4A0A0B4J1J8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.46■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.44■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Gm25238-201ENSMUST00000174914 89 ntBASIC17.41■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tcrg-V4A0A0B4J1J8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 AL845457.1-201ENSMUST00000197244 68 ntBASIC17.39■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC17.37■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC17.34■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Tcrg-V4A0A0B4J1J8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.3■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Rab21-202ENSMUST00000218831 843 ntBASIC17.29■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.29■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.28■□□□□ 0.36
Tcrg-V4A0A0B4J1J8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms