Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbv12-2A0A0B4J1H1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Trbv12-2A0A0B4J1H1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Gm8109-201ENSMUST00000194076 746 ntBASIC18.39■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.39■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.37■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trbv12-2A0A0B4J1H1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.36■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.34■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trbv12-2A0A0B4J1H1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trbv12-2A0A0B4J1H1 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.33■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.32■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.3■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.3■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Gm16148-201ENSMUST00000119653 893 ntBASIC18.29■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.28■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.27■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trbv12-2A0A0B4J1H1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trbv12-2A0A0B4J1H1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Particl-201ENSMUST00000205370 1560 ntBASIC18.25■□□□□ 0.51
Trbv12-2A0A0B4J1H1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.25■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-2A0A0B4J1H1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv12-2A0A0B4J1H1 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms