Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV7-1A0A0A6YYK4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRBV7-1A0A0A6YYK4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV7-1A0A0A6YYK4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRBV7-1A0A0A6YYK4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRBV7-1A0A0A6YYK4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.74■□□□□ 0.75
TRBV7-1A0A0A6YYK4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV7-1A0A0A6YYK4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRBV7-1A0A0A6YYK4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.72■□□□□ 0.75
TRBV7-1A0A0A6YYK4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV7-1A0A0A6YYK4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV7-1A0A0A6YYK4 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV7-1A0A0A6YYK4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRBV7-1A0A0A6YYK4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV7-1A0A0A6YYK4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TRBV7-1A0A0A6YYK4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRBV7-1A0A0A6YYK4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.71■□□□□ 0.75
TRBV7-1A0A0A6YYK4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRBV7-1A0A0A6YYK4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRBV7-1A0A0A6YYK4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBV7-1A0A0A6YYK4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV7-1A0A0A6YYK4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV7-1A0A0A6YYK4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRBV7-1A0A0A6YYK4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.69■□□□□ 0.74
TRBV7-1A0A0A6YYK4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV7-1A0A0A6YYK4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV7-1A0A0A6YYK4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.69■□□□□ 0.74
TRBV7-1A0A0A6YYK4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBV7-1A0A0A6YYK4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV7-1A0A0A6YYK4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TRBV7-1A0A0A6YYK4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV7-1A0A0A6YYK4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.68■□□□□ 0.74
TRBV7-1A0A0A6YYK4 LINC01971-201ENST00000617888 1048 ntBASIC19.68■□□□□ 0.74
TRBV7-1A0A0A6YYK4 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBV7-1A0A0A6YYK4 BX255925.1-201ENST00000566954 1854 ntBASIC19.67■□□□□ 0.74
TRBV7-1A0A0A6YYK4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV7-1A0A0A6YYK4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV7-1A0A0A6YYK4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV7-1A0A0A6YYK4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBV7-1A0A0A6YYK4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBV7-1A0A0A6YYK4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TRBV7-1A0A0A6YYK4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV7-1A0A0A6YYK4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBV7-1A0A0A6YYK4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV7-1A0A0A6YYK4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV7-1A0A0A6YYK4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV7-1A0A0A6YYK4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.65■□□□□ 0.74
TRBV7-1A0A0A6YYK4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.65■□□□□ 0.74
TRBV7-1A0A0A6YYK4 AC110285.7-201ENST00000624417 1536 ntBASIC19.65■□□□□ 0.74
TRBV7-1A0A0A6YYK4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRBV7-1A0A0A6YYK4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRBV7-1A0A0A6YYK4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.64■□□□□ 0.74
TRBV7-1A0A0A6YYK4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.64■□□□□ 0.73
TRBV7-1A0A0A6YYK4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV7-1A0A0A6YYK4 LINC01003-201ENST00000564834 1764 ntBASIC19.64■□□□□ 0.73
TRBV7-1A0A0A6YYK4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRBV7-1A0A0A6YYK4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV7-1A0A0A6YYK4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRBV7-1A0A0A6YYK4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRBV7-1A0A0A6YYK4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.63■□□□□ 0.73
TRBV7-1A0A0A6YYK4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV7-1A0A0A6YYK4 AC018358.1-201ENST00000631079 1402 ntBASIC19.63■□□□□ 0.73
TRBV7-1A0A0A6YYK4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.63■□□□□ 0.73
TRBV7-1A0A0A6YYK4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.63■□□□□ 0.73
TRBV7-1A0A0A6YYK4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV7-1A0A0A6YYK4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV7-1A0A0A6YYK4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRBV7-1A0A0A6YYK4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV7-1A0A0A6YYK4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV7-1A0A0A6YYK4 ZNRF2P2-203ENST00000454624 420 ntBASIC19.61■□□□□ 0.73
TRBV7-1A0A0A6YYK4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.61■□□□□ 0.73
TRBV7-1A0A0A6YYK4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV7-1A0A0A6YYK4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV7-1A0A0A6YYK4 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV7-1A0A0A6YYK4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV7-1A0A0A6YYK4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
TRBV7-1A0A0A6YYK4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRBV7-1A0A0A6YYK4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV7-1A0A0A6YYK4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.58■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TRBV7-1A0A0A6YYK4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.58■□□□□ 0.72
TRBV7-1A0A0A6YYK4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRBV7-1A0A0A6YYK4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L13-201ENST00000554103 1267 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L15-201ENST00000611059 1267 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L11-201ENST00000611504 1267 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L12-201ENST00000614593 1267 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L23-201ENST00000615195 1269 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L24-201ENST00000617576 1269 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L22-201ENST00000618238 1269 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L20-201ENST00000619712 1269 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L14-201ENST00000621227 1267 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L21-201ENST00000622058 1269 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L10-201ENST00000622460 1267 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 DUX4L25-201ENST00000624915 1269 ntBASIC19.57■□□□□ 0.72
TRBV7-1A0A0A6YYK4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV7-1A0A0A6YYK4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms