Protein–RNA interactions for Protein: A0A0A6YYG2

TRBV6-6, T-cell receptor beta variable 6-6 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-6A0A0A6YYG2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV6-6A0A0A6YYG2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV6-6A0A0A6YYG2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV6-6A0A0A6YYG2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TRBV6-6A0A0A6YYG2 LINC00273-201ENST00000539813 1452 ntBASIC21.14■□□□□ 0.98
TRBV6-6A0A0A6YYG2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
TRBV6-6A0A0A6YYG2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TRBV6-6A0A0A6YYG2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRBV6-6A0A0A6YYG2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRBV6-6A0A0A6YYG2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.14■□□□□ 0.97
TRBV6-6A0A0A6YYG2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.13■□□□□ 0.97
TRBV6-6A0A0A6YYG2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.13■□□□□ 0.97
TRBV6-6A0A0A6YYG2 WHAMMP2-203ENST00000563942 1603 ntBASIC21.13■□□□□ 0.97
TRBV6-6A0A0A6YYG2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV6-6A0A0A6YYG2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV6-6A0A0A6YYG2 MIR6090-201ENST00000622481 60 ntBASIC21.12■□□□□ 0.97
TRBV6-6A0A0A6YYG2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV6-6A0A0A6YYG2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV6-6A0A0A6YYG2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRBV6-6A0A0A6YYG2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV6-6A0A0A6YYG2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV6-6A0A0A6YYG2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV6-6A0A0A6YYG2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
TRBV6-6A0A0A6YYG2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV6-6A0A0A6YYG2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
TRBV6-6A0A0A6YYG2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.11■□□□□ 0.97
TRBV6-6A0A0A6YYG2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV6-6A0A0A6YYG2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.1■□□□□ 0.97
TRBV6-6A0A0A6YYG2 DUX4L28-201ENST00000623687 678 ntBASIC21.1■□□□□ 0.97
TRBV6-6A0A0A6YYG2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.1■□□□□ 0.97
TRBV6-6A0A0A6YYG2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBV6-6A0A0A6YYG2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBV6-6A0A0A6YYG2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV6-6A0A0A6YYG2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.09■□□□□ 0.97
TRBV6-6A0A0A6YYG2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV6-6A0A0A6YYG2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV6-6A0A0A6YYG2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV6-6A0A0A6YYG2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRBV6-6A0A0A6YYG2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TRBV6-6A0A0A6YYG2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.07■□□□□ 0.96
TRBV6-6A0A0A6YYG2 MIR3665-201ENST00000578708 105 ntBASIC21.07■□□□□ 0.96
TRBV6-6A0A0A6YYG2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV6-6A0A0A6YYG2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV6-6A0A0A6YYG2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV6-6A0A0A6YYG2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.05■□□□□ 0.96
TRBV6-6A0A0A6YYG2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV6-6A0A0A6YYG2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV6-6A0A0A6YYG2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV6-6A0A0A6YYG2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV6-6A0A0A6YYG2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.04■□□□□ 0.96
TRBV6-6A0A0A6YYG2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.04■□□□□ 0.96
TRBV6-6A0A0A6YYG2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV6-6A0A0A6YYG2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV6-6A0A0A6YYG2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV6-6A0A0A6YYG2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV6-6A0A0A6YYG2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRBV6-6A0A0A6YYG2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRBV6-6A0A0A6YYG2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV6-6A0A0A6YYG2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV6-6A0A0A6YYG2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRBV6-6A0A0A6YYG2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.01■□□□□ 0.95
TRBV6-6A0A0A6YYG2 AP006261.1-201ENST00000584783 668 ntBASIC21.01■□□□□ 0.95
TRBV6-6A0A0A6YYG2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
TRBV6-6A0A0A6YYG2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.01■□□□□ 0.95
TRBV6-6A0A0A6YYG2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21■□□□□ 0.95
TRBV6-6A0A0A6YYG2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21■□□□□ 0.95
TRBV6-6A0A0A6YYG2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRBV6-6A0A0A6YYG2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRBV6-6A0A0A6YYG2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV6-6A0A0A6YYG2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV6-6A0A0A6YYG2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.99■□□□□ 0.95
TRBV6-6A0A0A6YYG2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.98■□□□□ 0.95
TRBV6-6A0A0A6YYG2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV6-6A0A0A6YYG2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV6-6A0A0A6YYG2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TRBV6-6A0A0A6YYG2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.98■□□□□ 0.95
TRBV6-6A0A0A6YYG2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.98■□□□□ 0.95
TRBV6-6A0A0A6YYG2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRBV6-6A0A0A6YYG2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV6-6A0A0A6YYG2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRBV6-6A0A0A6YYG2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.97■□□□□ 0.95
TRBV6-6A0A0A6YYG2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.97■□□□□ 0.95
TRBV6-6A0A0A6YYG2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRBV6-6A0A0A6YYG2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV6-6A0A0A6YYG2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRBV6-6A0A0A6YYG2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.97■□□□□ 0.95
TRBV6-6A0A0A6YYG2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.96■□□□□ 0.95
TRBV6-6A0A0A6YYG2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRBV6-6A0A0A6YYG2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV6-6A0A0A6YYG2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV6-6A0A0A6YYG2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV6-6A0A0A6YYG2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV6-6A0A0A6YYG2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV6-6A0A0A6YYG2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV6-6A0A0A6YYG2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV6-6A0A0A6YYG2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV6-6A0A0A6YYG2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV6-6A0A0A6YYG2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV6-6A0A0A6YYG2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV6-6A0A0A6YYG2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms