Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trav9d-1A0A075B699 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Trav9d-1A0A075B699 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav9d-1A0A075B699 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav9d-1A0A075B699 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9d-1A0A075B699 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9d-1A0A075B699 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav9d-1A0A075B699 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9d-1A0A075B699 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9d-1A0A075B699 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9d-1A0A075B699 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9d-1A0A075B699 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav9d-1A0A075B699 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.82■□□□□ 0.44
Trav9d-1A0A075B699 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.82■□□□□ 0.44
Trav9d-1A0A075B699 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trav9d-1A0A075B699 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav9d-1A0A075B699 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav9d-1A0A075B699 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav9d-1A0A075B699 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav9d-1A0A075B699 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav9d-1A0A075B699 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav9d-1A0A075B699 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav9d-1A0A075B699 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav9d-1A0A075B699 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav9d-1A0A075B699 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav9d-1A0A075B699 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav9d-1A0A075B699 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav9d-1A0A075B699 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav9d-1A0A075B699 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9d-1A0A075B699 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9d-1A0A075B699 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9d-1A0A075B699 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.78■□□□□ 0.44
Trav9d-1A0A075B699 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9d-1A0A075B699 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav9d-1A0A075B699 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav9d-1A0A075B699 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Trav9d-1A0A075B699 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav9d-1A0A075B699 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trav9d-1A0A075B699 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trav9d-1A0A075B699 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav9d-1A0A075B699 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav9d-1A0A075B699 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav9d-1A0A075B699 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav9d-1A0A075B699 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav9d-1A0A075B699 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav9d-1A0A075B699 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav9d-1A0A075B699 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav9d-1A0A075B699 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav9d-1A0A075B699 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav9d-1A0A075B699 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav9d-1A0A075B699 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav9d-1A0A075B699 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trav9d-1A0A075B699 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav9d-1A0A075B699 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav9d-1A0A075B699 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav9d-1A0A075B699 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Trav9d-1A0A075B699 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.72■□□□□ 0.43
Trav9d-1A0A075B699 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav9d-1A0A075B699 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav9d-1A0A075B699 Particl-201ENSMUST00000205370 1560 ntBASIC17.71■□□□□ 0.43
Trav9d-1A0A075B699 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav9d-1A0A075B699 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav9d-1A0A075B699 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav9d-1A0A075B699 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav9d-1A0A075B699 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav9d-1A0A075B699 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav9d-1A0A075B699 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav9d-1A0A075B699 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav9d-1A0A075B699 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav9d-1A0A075B699 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav9d-1A0A075B699 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav9d-1A0A075B699 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav9d-1A0A075B699 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav9d-1A0A075B699 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Trav9d-1A0A075B699 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.67■□□□□ 0.42
Trav9d-1A0A075B699 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav9d-1A0A075B699 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trav9d-1A0A075B699 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav9d-1A0A075B699 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav9d-1A0A075B699 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav9d-1A0A075B699 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9d-1A0A075B699 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav9d-1A0A075B699 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9d-1A0A075B699 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9d-1A0A075B699 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9d-1A0A075B699 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav9d-1A0A075B699 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9d-1A0A075B699 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.64■□□□□ 0.41
Trav9d-1A0A075B699 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9d-1A0A075B699 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9d-1A0A075B699 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9d-1A0A075B699 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9d-1A0A075B699 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9d-1A0A075B699 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav9d-1A0A075B699 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trav9d-1A0A075B699 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9d-1A0A075B699 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9d-1A0A075B699 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9d-1A0A075B699 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav9d-1A0A075B699 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms