Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-3A0A075B695 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-3A0A075B695 Nkain2-201ENSMUST00000092602 558 ntBASIC16.49■□□□□ 0.23
Trav9d-3A0A075B695 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav9d-3A0A075B695 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9d-3A0A075B695 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav9d-3A0A075B695 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
Trav9d-3A0A075B695 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC16.48■□□□□ 0.23
Trav9d-3A0A075B695 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9d-3A0A075B695 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9d-3A0A075B695 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trav9d-3A0A075B695 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav9d-3A0A075B695 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav9d-3A0A075B695 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav9d-3A0A075B695 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav9d-3A0A075B695 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Trav9d-3A0A075B695 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-3A0A075B695 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-3A0A075B695 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-3A0A075B695 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Trav9d-3A0A075B695 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav9d-3A0A075B695 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav9d-3A0A075B695 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9d-3A0A075B695 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9d-3A0A075B695 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav9d-3A0A075B695 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav9d-3A0A075B695 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9d-3A0A075B695 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9d-3A0A075B695 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9d-3A0A075B695 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav9d-3A0A075B695 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav9d-3A0A075B695 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-3A0A075B695 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Trav9d-3A0A075B695 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav9d-3A0A075B695 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-3A0A075B695 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Trav9d-3A0A075B695 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.43■□□□□ 0.22
Trav9d-3A0A075B695 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-3A0A075B695 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav9d-3A0A075B695 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-3A0A075B695 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-3A0A075B695 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.42■□□□□ 0.22
Trav9d-3A0A075B695 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav9d-3A0A075B695 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.42■□□□□ 0.22
Trav9d-3A0A075B695 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.42■□□□□ 0.22
Trav9d-3A0A075B695 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav9d-3A0A075B695 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-3A0A075B695 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-3A0A075B695 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav9d-3A0A075B695 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.41■□□□□ 0.22
Trav9d-3A0A075B695 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav9d-3A0A075B695 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav9d-3A0A075B695 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-3A0A075B695 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav9d-3A0A075B695 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.22
Trav9d-3A0A075B695 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav9d-3A0A075B695 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav9d-3A0A075B695 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav9d-3A0A075B695 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav9d-3A0A075B695 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav9d-3A0A075B695 Gm6821-201ENSMUST00000107540 542 ntBASIC16.38■□□□□ 0.21
Trav9d-3A0A075B695 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9d-3A0A075B695 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9d-3A0A075B695 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9d-3A0A075B695 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav9d-3A0A075B695 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-3A0A075B695 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-3A0A075B695 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav9d-3A0A075B695 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-3A0A075B695 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-3A0A075B695 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav9d-3A0A075B695 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.35■□□□□ 0.21
Trav9d-3A0A075B695 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav9d-3A0A075B695 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9d-3A0A075B695 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9d-3A0A075B695 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav9d-3A0A075B695 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.34■□□□□ 0.21
Trav9d-3A0A075B695 Particl-201ENSMUST00000205370 1560 ntBASIC16.34■□□□□ 0.21
Trav9d-3A0A075B695 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9d-3A0A075B695 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav9d-3A0A075B695 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav9d-3A0A075B695 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-3A0A075B695 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-3A0A075B695 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-3A0A075B695 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
Trav9d-3A0A075B695 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav9d-3A0A075B695 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9d-3A0A075B695 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9d-3A0A075B695 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav9d-3A0A075B695 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9d-3A0A075B695 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav9d-3A0A075B695 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav9d-3A0A075B695 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.3■□□□□ 0.2
Trav9d-3A0A075B695 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-3A0A075B695 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-3A0A075B695 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-3A0A075B695 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9d-3A0A075B695 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav9d-3A0A075B695 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trav9d-3A0A075B695 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms