Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav16A0A075B653 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav16A0A075B653 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav16A0A075B653 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav16A0A075B653 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav16A0A075B653 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav16A0A075B653 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav16A0A075B653 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav16A0A075B653 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16A0A075B653 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16A0A075B653 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16A0A075B653 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16A0A075B653 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16A0A075B653 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16A0A075B653 Gm24804-201ENSMUST00000174982 85 ntBASIC17.82■□□□□ 0.44
Trav16A0A075B653 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16A0A075B653 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav16A0A075B653 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav16A0A075B653 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav16A0A075B653 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav16A0A075B653 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav16A0A075B653 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav16A0A075B653 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav16A0A075B653 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav16A0A075B653 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav16A0A075B653 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav16A0A075B653 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav16A0A075B653 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Trav16A0A075B653 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav16A0A075B653 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.8■□□□□ 0.44
Trav16A0A075B653 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trav16A0A075B653 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trav16A0A075B653 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav16A0A075B653 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav16A0A075B653 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav16A0A075B653 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav16A0A075B653 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav16A0A075B653 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav16A0A075B653 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav16A0A075B653 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav16A0A075B653 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav16A0A075B653 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav16A0A075B653 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trav16A0A075B653 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav16A0A075B653 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trav16A0A075B653 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav16A0A075B653 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav16A0A075B653 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav16A0A075B653 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav16A0A075B653 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Trav16A0A075B653 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Trav16A0A075B653 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav16A0A075B653 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav16A0A075B653 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav16A0A075B653 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav16A0A075B653 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Trav16A0A075B653 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav16A0A075B653 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav16A0A075B653 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav16A0A075B653 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav16A0A075B653 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.76■□□□□ 0.43
Trav16A0A075B653 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav16A0A075B653 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav16A0A075B653 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav16A0A075B653 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav16A0A075B653 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.75■□□□□ 0.43
Trav16A0A075B653 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav16A0A075B653 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16A0A075B653 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav16A0A075B653 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trav16A0A075B653 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16A0A075B653 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav16A0A075B653 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav16A0A075B653 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Trav16A0A075B653 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav16A0A075B653 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav16A0A075B653 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trav16A0A075B653 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav16A0A075B653 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trav16A0A075B653 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Trav16A0A075B653 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav16A0A075B653 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav16A0A075B653 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav16A0A075B653 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav16A0A075B653 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16A0A075B653 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16A0A075B653 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16A0A075B653 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16A0A075B653 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16A0A075B653 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16A0A075B653 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16A0A075B653 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav16A0A075B653 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav16A0A075B653 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav16A0A075B653 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav16A0A075B653 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav16A0A075B653 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav16A0A075B653 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav16A0A075B653 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav16A0A075B653 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 191.9 ms