Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav7-6A0A075B640 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-6A0A075B640 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-6A0A075B640 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-6A0A075B640 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-6A0A075B640 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-6A0A075B640 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-6A0A075B640 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-6A0A075B640 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-6A0A075B640 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7-6A0A075B640 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-6A0A075B640 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav7-6A0A075B640 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-6A0A075B640 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-6A0A075B640 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav7-6A0A075B640 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav7-6A0A075B640 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC16.12■□□□□ 0.17
Trav7-6A0A075B640 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-6A0A075B640 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav7-6A0A075B640 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-6A0A075B640 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav7-6A0A075B640 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav7-6A0A075B640 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-6A0A075B640 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-6A0A075B640 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav7-6A0A075B640 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trav7-6A0A075B640 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Trav7-6A0A075B640 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.08■□□□□ 0.16
Trav7-6A0A075B640 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-6A0A075B640 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-6A0A075B640 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Trav7-6A0A075B640 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-6A0A075B640 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav7-6A0A075B640 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-6A0A075B640 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-6A0A075B640 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-6A0A075B640 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-6A0A075B640 Gm45855-201ENSMUST00000212546 880 ntBASIC16.07■□□□□ 0.16
Trav7-6A0A075B640 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-6A0A075B640 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-6A0A075B640 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav7-6A0A075B640 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav7-6A0A075B640 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Trav7-6A0A075B640 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-6A0A075B640 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC16.06■□□□□ 0.16
Trav7-6A0A075B640 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-6A0A075B640 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.06■□□□□ 0.16
Trav7-6A0A075B640 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav7-6A0A075B640 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-6A0A075B640 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-6A0A075B640 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav7-6A0A075B640 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-6A0A075B640 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-6A0A075B640 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-6A0A075B640 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.05■□□□□ 0.16
Trav7-6A0A075B640 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav7-6A0A075B640 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-6A0A075B640 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-6A0A075B640 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-6A0A075B640 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC16.04■□□□□ 0.16
Trav7-6A0A075B640 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav7-6A0A075B640 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav7-6A0A075B640 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-6A0A075B640 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-6A0A075B640 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav7-6A0A075B640 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7-6A0A075B640 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7-6A0A075B640 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav7-6A0A075B640 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Trav7-6A0A075B640 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav7-6A0A075B640 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav7-6A0A075B640 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.02■□□□□ 0.15
Trav7-6A0A075B640 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav7-6A0A075B640 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav7-6A0A075B640 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-6A0A075B640 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-6A0A075B640 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-6A0A075B640 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Trav7-6A0A075B640 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav7-6A0A075B640 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16■□□□□ 0.15
Trav7-6A0A075B640 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav7-6A0A075B640 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav7-6A0A075B640 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-6A0A075B640 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC15.99■□□□□ 0.15
Trav7-6A0A075B640 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-6A0A075B640 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
Trav7-6A0A075B640 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-6A0A075B640 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav7-6A0A075B640 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-6A0A075B640 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Trav7-6A0A075B640 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav7-6A0A075B640 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav7-6A0A075B640 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav7-6A0A075B640 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-6A0A075B640 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav7-6A0A075B640 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-6A0A075B640 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-6A0A075B640 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.97■□□□□ 0.15
Trav7-6A0A075B640 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav7-6A0A075B640 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms