Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trav1A0A075B5Z4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trav1A0A075B5Z4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.75■■□□□ 1.07
Trav1A0A075B5Z4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Trav1A0A075B5Z4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trav1A0A075B5Z4 Nkain2-201ENSMUST00000092602 558 ntBASIC21.74■■□□□ 1.07
Trav1A0A075B5Z4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav1A0A075B5Z4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav1A0A075B5Z4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trav1A0A075B5Z4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav1A0A075B5Z4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Trav1A0A075B5Z4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav1A0A075B5Z4 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.73■■□□□ 1.07
Trav1A0A075B5Z4 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trav1A0A075B5Z4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trav1A0A075B5Z4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trav1A0A075B5Z4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trav1A0A075B5Z4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Trav1A0A075B5Z4 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.71■■□□□ 1.07
Trav1A0A075B5Z4 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.71■■□□□ 1.07
Trav1A0A075B5Z4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trav1A0A075B5Z4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trav1A0A075B5Z4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.7■■□□□ 1.07
Trav1A0A075B5Z4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Trav1A0A075B5Z4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trav1A0A075B5Z4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav1A0A075B5Z4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Trav1A0A075B5Z4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Trav1A0A075B5Z4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav1A0A075B5Z4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav1A0A075B5Z4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav1A0A075B5Z4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trav1A0A075B5Z4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.68■■□□□ 1.06
Trav1A0A075B5Z4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Trav1A0A075B5Z4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trav1A0A075B5Z4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav1A0A075B5Z4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav1A0A075B5Z4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trav1A0A075B5Z4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trav1A0A075B5Z4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav1A0A075B5Z4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trav1A0A075B5Z4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trav1A0A075B5Z4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.64■■□□□ 1.05
Trav1A0A075B5Z4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.63■■□□□ 1.05
Trav1A0A075B5Z4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.63■■□□□ 1.05
Trav1A0A075B5Z4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.63■■□□□ 1.05
Trav1A0A075B5Z4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Trav1A0A075B5Z4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Trav1A0A075B5Z4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Trav1A0A075B5Z4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav1A0A075B5Z4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Trav1A0A075B5Z4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trav1A0A075B5Z4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav1A0A075B5Z4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav1A0A075B5Z4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav1A0A075B5Z4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Trav1A0A075B5Z4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav1A0A075B5Z4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav1A0A075B5Z4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav1A0A075B5Z4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav1A0A075B5Z4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav1A0A075B5Z4 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav1A0A075B5Z4 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav1A0A075B5Z4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Trav1A0A075B5Z4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav1A0A075B5Z4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.56■■□□□ 1.04
Trav1A0A075B5Z4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav1A0A075B5Z4 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trav1A0A075B5Z4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav1A0A075B5Z4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav1A0A075B5Z4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav1A0A075B5Z4 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav1A0A075B5Z4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav1A0A075B5Z4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav1A0A075B5Z4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Trav1A0A075B5Z4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.54■■□□□ 1.04
Trav1A0A075B5Z4 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trav1A0A075B5Z4 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Trav1A0A075B5Z4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav1A0A075B5Z4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav1A0A075B5Z4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.53■■□□□ 1.04
Trav1A0A075B5Z4 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.53■■□□□ 1.04
Trav1A0A075B5Z4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Trav1A0A075B5Z4 Gm37136-201ENSMUST00000194368 194 ntBASIC21.52■■□□□ 1.04
Trav1A0A075B5Z4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav1A0A075B5Z4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav1A0A075B5Z4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trav1A0A075B5Z4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Trav1A0A075B5Z4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.51■■□□□ 1.03
Trav1A0A075B5Z4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Trav1A0A075B5Z4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.51■■□□□ 1.03
Trav1A0A075B5Z4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav1A0A075B5Z4 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.5■■□□□ 1.03
Trav1A0A075B5Z4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav1A0A075B5Z4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.5■■□□□ 1.03
Trav1A0A075B5Z4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.5■■□□□ 1.03
Trav1A0A075B5Z4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trav1A0A075B5Z4 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.5■■□□□ 1.03
Trav1A0A075B5Z4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav1A0A075B5Z4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms