Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Gm23634-201ENSMUST00000175071 91 ntBASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC21.2■□□□□ 0.99
Ccdc30Q8BVF4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Ccdc30Q8BVF4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Ccdc30Q8BVF4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Ccdc30Q8BVF4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Ccdc30Q8BVF4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 Gm6623-201ENSMUST00000173570 544 ntBASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc30Q8BVF4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms