Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf1aP25118 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.78□□□□□ -0.2
Tnfrsf1aP25118 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf1aP25118 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf1aP25118 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tnfrsf1aP25118 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tnfrsf1aP25118 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tnfrsf1aP25118 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf1aP25118 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfrsf1aP25118 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfrsf1aP25118 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfrsf1aP25118 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfrsf1aP25118 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfrsf1aP25118 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfrsf1aP25118 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfrsf1aP25118 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tnfrsf1aP25118 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tnfrsf1aP25118 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Gm30025-201ENSMUST00000218555 728 ntBASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tnfrsf1aP25118 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tnfrsf1aP25118 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf1aP25118 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.74□□□□□ -0.21
Tnfrsf1aP25118 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tnfrsf1aP25118 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms