Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC21.27■■□□□ 1
Ccdc30Q8BVF4 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc30Q8BVF4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ccdc30Q8BVF4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ccdc30Q8BVF4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Ccdc30Q8BVF4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ccdc30Q8BVF4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ccdc30Q8BVF4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc30Q8BVF4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC21.26■□□□□ 0.99
Ccdc30Q8BVF4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ccdc30Q8BVF4 Mir770-201ENSMUST00000103252 94 ntBASIC21.26■□□□□ 0.99
Ccdc30Q8BVF4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc30Q8BVF4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc30Q8BVF4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc30Q8BVF4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC21.26■□□□□ 0.99
Ccdc30Q8BVF4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ccdc30Q8BVF4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC21.25■□□□□ 0.99
Ccdc30Q8BVF4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Gm6345-202ENSMUST00000180900 204 ntBASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ccdc30Q8BVF4 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Gm6659-201ENSMUST00000174752 547 ntBASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccdc30Q8BVF4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Gm9013-201ENSMUST00000132939 882 ntBASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Gm5587-201ENSMUST00000206270 674 ntBASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 AC158538.1-201ENSMUST00000225870 294 ntBASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Ccdc30Q8BVF4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Ccdc30Q8BVF4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms