Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pfdn6Q03958 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pfdn6Q03958 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn6Q03958 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn6Q03958 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn6Q03958 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn6Q03958 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.52■□□□□ 0.24
Pfdn6Q03958 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn6Q03958 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn6Q03958 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.52■□□□□ 0.24
Pfdn6Q03958 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn6Q03958 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.52■□□□□ 0.24
Pfdn6Q03958 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn6Q03958 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn6Q03958 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn6Q03958 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pfdn6Q03958 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pfdn6Q03958 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pfdn6Q03958 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.52■□□□□ 0.23
Pfdn6Q03958 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pfdn6Q03958 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pfdn6Q03958 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.51■□□□□ 0.23
Pfdn6Q03958 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.51■□□□□ 0.23
Pfdn6Q03958 Gm13436-201ENSMUST00000120418 567 ntBASIC16.51■□□□□ 0.23
Pfdn6Q03958 Gm18115-201ENSMUST00000221209 621 ntBASIC16.51■□□□□ 0.23
Pfdn6Q03958 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.51■□□□□ 0.23
Pfdn6Q03958 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pfdn6Q03958 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.5■□□□□ 0.23
Pfdn6Q03958 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Gm13186-201ENSMUST00000118031 316 ntBASIC16.5■□□□□ 0.23
Pfdn6Q03958 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pfdn6Q03958 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.5■□□□□ 0.23
Pfdn6Q03958 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.5■□□□□ 0.23
Pfdn6Q03958 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Gm13559-201ENSMUST00000120476 863 ntBASIC16.49■□□□□ 0.23
Pfdn6Q03958 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pfdn6Q03958 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.49■□□□□ 0.23
Pfdn6Q03958 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.49■□□□□ 0.23
Pfdn6Q03958 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.49■□□□□ 0.23
Pfdn6Q03958 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Gm7370-201ENSMUST00000219471 767 ntBASIC16.49■□□□□ 0.23
Pfdn6Q03958 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pfdn6Q03958 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms