Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4933424G06RikA0A140LIP3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4933424G06RikA0A140LIP3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
4933424G06RikA0A140LIP3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
4933424G06RikA0A140LIP3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
4933424G06RikA0A140LIP3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
4933424G06RikA0A140LIP3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Birc2-201ENSMUST00000054878 378 ntBASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.79■□□□□ 0.28
4933424G06RikA0A140LIP3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Gm43347-201ENSMUST00000200226 580 ntBASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
4933424G06RikA0A140LIP3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Rprl3-201ENSMUST00000157400 290 ntBASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Gm44430-201ENSMUST00000203376 995 ntBASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
4933424G06RikA0A140LIP3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
4933424G06RikA0A140LIP3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
4933424G06RikA0A140LIP3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
4933424G06RikA0A140LIP3 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.77■□□□□ 0.27
4933424G06RikA0A140LIP3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
4933424G06RikA0A140LIP3 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
4933424G06RikA0A140LIP3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
4933424G06RikA0A140LIP3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
4933424G06RikA0A140LIP3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
4933424G06RikA0A140LIP3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
4933424G06RikA0A140LIP3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
4933424G06RikA0A140LIP3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
4933424G06RikA0A140LIP3 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.76■□□□□ 0.27
4933424G06RikA0A140LIP3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
4933424G06RikA0A140LIP3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
4933424G06RikA0A140LIP3 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.76■□□□□ 0.27
4933424G06RikA0A140LIP3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms