Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Uspl1Q3ULM6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Gm45328-201ENSMUST00000210942 917 ntBASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Uspl1Q3ULM6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Uspl1Q3ULM6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Uspl1Q3ULM6 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.39■■□□□ 1.02
Uspl1Q3ULM6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Uspl1Q3ULM6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
Uspl1Q3ULM6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Uspl1Q3ULM6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Uspl1Q3ULM6 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC21.39■■□□□ 1.01
Uspl1Q3ULM6 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Uspl1Q3ULM6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Uspl1Q3ULM6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Uspl1Q3ULM6 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 Olfr129-201ENSMUST00000122318 993 ntBASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Uspl1Q3ULM6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Uspl1Q3ULM6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Gm33142-201ENSMUST00000193913 867 ntBASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Gm44430-201ENSMUST00000203376 995 ntBASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Uspl1Q3ULM6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Uspl1Q3ULM6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Uspl1Q3ULM6 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Uspl1Q3ULM6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Uspl1Q3ULM6 Gm14464-201ENSMUST00000119658 1254 ntBASIC21.35■■□□□ 1.01
Uspl1Q3ULM6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Uspl1Q3ULM6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Uspl1Q3ULM6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Uspl1Q3ULM6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Uspl1Q3ULM6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Uspl1Q3ULM6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms