Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC24.57■■□□□ 1.52
NclP09405 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
NclP09405 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
NclP09405 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC24.57■■□□□ 1.52
NclP09405 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
NclP09405 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
NclP09405 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NclP09405 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NclP09405 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NclP09405 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
NclP09405 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC24.56■■□□□ 1.52
NclP09405 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NclP09405 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NclP09405 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NclP09405 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NclP09405 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NclP09405 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC24.56■■□□□ 1.52
NclP09405 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
NclP09405 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NclP09405 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC24.56■■□□□ 1.52
NclP09405 Gm34391-201ENSMUST00000203706 907 ntBASIC24.56■■□□□ 1.52
NclP09405 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC24.56■■□□□ 1.52
NclP09405 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC24.56■■□□□ 1.52
NclP09405 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
NclP09405 Birc2-201ENSMUST00000054878 378 ntBASIC24.56■■□□□ 1.52
NclP09405 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NclP09405 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC24.56■■□□□ 1.52
NclP09405 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NclP09405 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC24.56■■□□□ 1.52
NclP09405 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NclP09405 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NclP09405 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
NclP09405 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
NclP09405 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
NclP09405 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NclP09405 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NclP09405 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
NclP09405 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
NclP09405 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC24.55■■□□□ 1.52
NclP09405 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC24.55■■□□□ 1.52
NclP09405 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
NclP09405 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
NclP09405 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NclP09405 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NclP09405 Gm15635-204ENSMUST00000208024 2539 ntBASIC24.55■■□□□ 1.52
NclP09405 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC24.54■■□□□ 1.52
NclP09405 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
NclP09405 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC24.54■■□□□ 1.52
NclP09405 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC24.54■■□□□ 1.52
NclP09405 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC24.54■■□□□ 1.52
NclP09405 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
NclP09405 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC24.54■■□□□ 1.52
NclP09405 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC24.54■■□□□ 1.52
NclP09405 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
NclP09405 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NclP09405 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NclP09405 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
NclP09405 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
NclP09405 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC24.53■■□□□ 1.52
NclP09405 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC24.53■■□□□ 1.52
NclP09405 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC24.53■■□□□ 1.52
NclP09405 Gm7461-201ENSMUST00000058918 827 ntBASIC24.53■■□□□ 1.52
NclP09405 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
NclP09405 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
NclP09405 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC24.53■■□□□ 1.52
NclP09405 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NclP09405 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NclP09405 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NclP09405 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NclP09405 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
NclP09405 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NclP09405 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
NclP09405 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NclP09405 Gm10052-201ENSMUST00000168019 960 ntBASIC24.52■■□□□ 1.52
NclP09405 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC24.52■■□□□ 1.52
NclP09405 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC24.52■■□□□ 1.52
NclP09405 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC24.52■■□□□ 1.52
NclP09405 Gm7729-201ENSMUST00000050143 801 ntBASIC24.52■■□□□ 1.52
NclP09405 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
NclP09405 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC24.52■■□□□ 1.52
NclP09405 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
NclP09405 Gm5898-201ENSMUST00000121016 2071 ntBASIC24.52■■□□□ 1.52
NclP09405 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
NclP09405 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
NclP09405 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
NclP09405 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
NclP09405 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
NclP09405 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
NclP09405 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms