Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Mdc1Q5PSV9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Gm42670-201ENSMUST00000201816 1292 ntBASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Mdc1Q5PSV9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.68■■□□□ 1.06
Mdc1Q5PSV9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Mdc1Q5PSV9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Mdc1Q5PSV9 Gm6550-201ENSMUST00000187574 993 ntBASIC21.68■■□□□ 1.06
Mdc1Q5PSV9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Mdc1Q5PSV9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mdc1Q5PSV9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mdc1Q5PSV9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mdc1Q5PSV9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Mdc1Q5PSV9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Mdc1Q5PSV9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.67■■□□□ 1.06
Mdc1Q5PSV9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mdc1Q5PSV9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mdc1Q5PSV9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mdc1Q5PSV9 Gm13036-201ENSMUST00000117799 748 ntBASIC21.67■■□□□ 1.06
Mdc1Q5PSV9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mdc1Q5PSV9 Gm9172-201ENSMUST00000212092 954 ntBASIC21.67■■□□□ 1.06
Mdc1Q5PSV9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Mdc1Q5PSV9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Mdc1Q5PSV9 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Gm23935-201ENSMUST00000102303 57 ntBASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Gm24270-201ENSMUST00000102326 57 ntBASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Gm24245-201ENSMUST00000157318 57 ntBASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.66■■□□□ 1.06
Mdc1Q5PSV9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 AC084391.1-201ENSMUST00000200651 141 ntBASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Mdc1Q5PSV9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Mdc1Q5PSV9 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.64■■□□□ 1.06
Mdc1Q5PSV9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Mdc1Q5PSV9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Mdc1Q5PSV9 Gm13418-201ENSMUST00000119097 944 ntBASIC21.64■■□□□ 1.06
Mdc1Q5PSV9 Psmb5-202ENSMUST00000227257 622 ntBASIC21.64■■□□□ 1.06
Mdc1Q5PSV9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Mdc1Q5PSV9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Mdc1Q5PSV9 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.64■■□□□ 1.05
Mdc1Q5PSV9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Mdc1Q5PSV9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Mdc1Q5PSV9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.64■■□□□ 1.05
Mdc1Q5PSV9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Mdc1Q5PSV9 Gm15173-201ENSMUST00000122049 433 ntBASIC21.63■■□□□ 1.05
Mdc1Q5PSV9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC21.63■■□□□ 1.05
Mdc1Q5PSV9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC21.63■■□□□ 1.05
Mdc1Q5PSV9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Mdc1Q5PSV9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC21.63■■□□□ 1.05
Mdc1Q5PSV9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC21.63■■□□□ 1.05
Mdc1Q5PSV9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms