Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Gm11249-201ENSMUST00000117071 859 ntBASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Gm18025-201ENSMUST00000221733 862 ntBASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trim43aQ3TL54 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Gm18666-201ENSMUST00000190039 958 ntBASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.75■□□□□ 0.43
Trim43aQ3TL54 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.74■□□□□ 0.43
Trim43aQ3TL54 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Gm42545-201ENSMUST00000202755 922 ntBASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trim43aQ3TL54 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Gm24841-201ENSMUST00000158676 357 ntBASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trim43aQ3TL54 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Gm10812-201ENSMUST00000099864 546 ntBASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trim43aQ3TL54 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms