Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Nr1h3Q9Z0Y9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Nr1h3Q9Z0Y9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.71■■□□□ 1.71
Nr1h3Q9Z0Y9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Nr1h3Q9Z0Y9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Nr1h3Q9Z0Y9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
Nr1h3Q9Z0Y9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC25.7■■□□□ 1.7
Nr1h3Q9Z0Y9 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Nr1h3Q9Z0Y9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
Nr1h3Q9Z0Y9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.69■■□□□ 1.7
Nr1h3Q9Z0Y9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Nr1h3Q9Z0Y9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Nr1h3Q9Z0Y9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
Nr1h3Q9Z0Y9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.66■■□□□ 1.7
Nr1h3Q9Z0Y9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Nr1h3Q9Z0Y9 Cap2-205ENSMUST00000225824 1634 ntBASIC25.66■■□□□ 1.7
Nr1h3Q9Z0Y9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Nr1h3Q9Z0Y9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Nr1h3Q9Z0Y9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Nr1h3Q9Z0Y9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC25.62■■□□□ 1.69
Nr1h3Q9Z0Y9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Nr1h3Q9Z0Y9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Nr1h3Q9Z0Y9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Nr1h3Q9Z0Y9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Nr1h3Q9Z0Y9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
Nr1h3Q9Z0Y9 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Nr1h3Q9Z0Y9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
Nr1h3Q9Z0Y9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
Nr1h3Q9Z0Y9 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Nr1h3Q9Z0Y9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
Nr1h3Q9Z0Y9 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.58■■□□□ 1.68
Nr1h3Q9Z0Y9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Nr1h3Q9Z0Y9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Nr1h3Q9Z0Y9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
Nr1h3Q9Z0Y9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Nr1h3Q9Z0Y9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Nr1h3Q9Z0Y9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Nr1h3Q9Z0Y9 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Nr1h3Q9Z0Y9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Nr1h3Q9Z0Y9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Nr1h3Q9Z0Y9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Nr1h3Q9Z0Y9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.54■■□□□ 1.68
Nr1h3Q9Z0Y9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
Nr1h3Q9Z0Y9 Gm4799-201ENSMUST00000095396 657 ntBASIC25.54■■□□□ 1.68
Nr1h3Q9Z0Y9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Nr1h3Q9Z0Y9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Nr1h3Q9Z0Y9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC25.53■■□□□ 1.68
Nr1h3Q9Z0Y9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC25.53■■□□□ 1.68
Nr1h3Q9Z0Y9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.52■■□□□ 1.68
Nr1h3Q9Z0Y9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.52■■□□□ 1.68
Nr1h3Q9Z0Y9 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Nr1h3Q9Z0Y9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Nr1h3Q9Z0Y9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Nr1h3Q9Z0Y9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC25.51■■□□□ 1.67
Nr1h3Q9Z0Y9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Nr1h3Q9Z0Y9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC25.5■■□□□ 1.67
Nr1h3Q9Z0Y9 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.5■■□□□ 1.67
Nr1h3Q9Z0Y9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Nr1h3Q9Z0Y9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Nr1h3Q9Z0Y9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Nr1h3Q9Z0Y9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.48■■□□□ 1.67
Nr1h3Q9Z0Y9 Scarna2-201ENSMUST00000157560 414 ntBASIC25.48■■□□□ 1.67
Nr1h3Q9Z0Y9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Nr1h3Q9Z0Y9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Nr1h3Q9Z0Y9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Nr1h3Q9Z0Y9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
Nr1h3Q9Z0Y9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Nr1h3Q9Z0Y9 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Nr1h3Q9Z0Y9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Nr1h3Q9Z0Y9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Nr1h3Q9Z0Y9 Gm11687-201ENSMUST00000118911 886 ntBASIC25.46■■□□□ 1.67
Nr1h3Q9Z0Y9 AC154454.1-201ENSMUST00000225253 216 ntBASIC25.46■■□□□ 1.67
Nr1h3Q9Z0Y9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Nr1h3Q9Z0Y9 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Nr1h3Q9Z0Y9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Nr1h3Q9Z0Y9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.45■■□□□ 1.66
Nr1h3Q9Z0Y9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.45■■□□□ 1.66
Nr1h3Q9Z0Y9 Mir3960-201ENSMUST00000198213 73 ntBASIC25.44■■□□□ 1.66
Nr1h3Q9Z0Y9 Pkd1-207ENSMUST00000228550 1050 ntBASIC25.44■■□□□ 1.66
Nr1h3Q9Z0Y9 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Nr1h3Q9Z0Y9 Gm9806-201ENSMUST00000051080 552 ntBASIC25.44■■□□□ 1.66
Nr1h3Q9Z0Y9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Nr1h3Q9Z0Y9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Nr1h3Q9Z0Y9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Nr1h3Q9Z0Y9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Nr1h3Q9Z0Y9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Nr1h3Q9Z0Y9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Nr1h3Q9Z0Y9 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.42■■□□□ 1.66
Nr1h3Q9Z0Y9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Nr1h3Q9Z0Y9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Nr1h3Q9Z0Y9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC25.41■■□□□ 1.66
Nr1h3Q9Z0Y9 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.4■■□□□ 1.66
Nr1h3Q9Z0Y9 Gm37136-201ENSMUST00000194368 194 ntBASIC25.4■■□□□ 1.66
Nr1h3Q9Z0Y9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Nr1h3Q9Z0Y9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
Nr1h3Q9Z0Y9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Nr1h3Q9Z0Y9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC25.37■■□□□ 1.65
Nr1h3Q9Z0Y9 Gm16437-201ENSMUST00000025669 507 ntBASIC25.37■■□□□ 1.65
Nr1h3Q9Z0Y9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Nr1h3Q9Z0Y9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.36■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms