Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
CYP46A1Q9Y6A2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CYP46A1Q9Y6A2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CYP46A1Q9Y6A2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CYP46A1Q9Y6A2 AC100797.4-201ENST00000631653 1827 ntBASIC30.45■■■□□ 2.46
CYP46A1Q9Y6A2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
CYP46A1Q9Y6A2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
CYP46A1Q9Y6A2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
CYP46A1Q9Y6A2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CYP46A1Q9Y6A2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.43■■■□□ 2.46
CYP46A1Q9Y6A2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
CYP46A1Q9Y6A2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.43■■■□□ 2.46
CYP46A1Q9Y6A2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CYP46A1Q9Y6A2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CYP46A1Q9Y6A2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CYP46A1Q9Y6A2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CYP46A1Q9Y6A2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CYP46A1Q9Y6A2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CYP46A1Q9Y6A2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.39■■■□□ 2.46
CYP46A1Q9Y6A2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.39■■■□□ 2.46
CYP46A1Q9Y6A2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CYP46A1Q9Y6A2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.39■■■□□ 2.46
CYP46A1Q9Y6A2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.45
CYP46A1Q9Y6A2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CYP46A1Q9Y6A2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CYP46A1Q9Y6A2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.38■■■□□ 2.45
CYP46A1Q9Y6A2 AL162393.1-201ENST00000437852 946 ntBASIC30.37■■■□□ 2.45
CYP46A1Q9Y6A2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CYP46A1Q9Y6A2 AC087741.3-201ENST00000624270 1347 ntBASIC30.37■■■□□ 2.45
CYP46A1Q9Y6A2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CYP46A1Q9Y6A2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
CYP46A1Q9Y6A2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
CYP46A1Q9Y6A2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.36■■■□□ 2.45
CYP46A1Q9Y6A2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
CYP46A1Q9Y6A2 AC135983.2-203ENST00000454486 1613 ntBASIC30.36■■■□□ 2.45
CYP46A1Q9Y6A2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
CYP46A1Q9Y6A2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CYP46A1Q9Y6A2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.35■■■□□ 2.45
CYP46A1Q9Y6A2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CYP46A1Q9Y6A2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CYP46A1Q9Y6A2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CYP46A1Q9Y6A2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.35■■■□□ 2.45
CYP46A1Q9Y6A2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
CYP46A1Q9Y6A2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CYP46A1Q9Y6A2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CYP46A1Q9Y6A2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CYP46A1Q9Y6A2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.33■■■□□ 2.45
CYP46A1Q9Y6A2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.33■■■□□ 2.45
CYP46A1Q9Y6A2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.32■■■□□ 2.45
CYP46A1Q9Y6A2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CYP46A1Q9Y6A2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CYP46A1Q9Y6A2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
CYP46A1Q9Y6A2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CYP46A1Q9Y6A2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.3■■■□□ 2.44
CYP46A1Q9Y6A2 LINC00273-201ENST00000539813 1452 ntBASIC30.3■■■□□ 2.44
CYP46A1Q9Y6A2 WHAMMP2-203ENST00000563942 1603 ntBASIC30.29■■■□□ 2.44
CYP46A1Q9Y6A2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CYP46A1Q9Y6A2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.28■■■□□ 2.44
CYP46A1Q9Y6A2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
CYP46A1Q9Y6A2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC30.28■■■□□ 2.44
CYP46A1Q9Y6A2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
CYP46A1Q9Y6A2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CYP46A1Q9Y6A2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CYP46A1Q9Y6A2 BX255925.1-201ENST00000566954 1854 ntBASIC30.27■■■□□ 2.44
CYP46A1Q9Y6A2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.26■■■□□ 2.43
CYP46A1Q9Y6A2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
CYP46A1Q9Y6A2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CYP46A1Q9Y6A2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CYP46A1Q9Y6A2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CYP46A1Q9Y6A2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
CYP46A1Q9Y6A2 AC044849.2-201ENST00000606596 710 ntBASIC30.24■■■□□ 2.43
CYP46A1Q9Y6A2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CYP46A1Q9Y6A2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CYP46A1Q9Y6A2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
CYP46A1Q9Y6A2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.23■■■□□ 2.43
CYP46A1Q9Y6A2 AP002414.2-202ENST00000590929 1450 ntBASIC30.23■■■□□ 2.43
CYP46A1Q9Y6A2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
CYP46A1Q9Y6A2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
CYP46A1Q9Y6A2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
CYP46A1Q9Y6A2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
CYP46A1Q9Y6A2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.21■■■□□ 2.43
CYP46A1Q9Y6A2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
CYP46A1Q9Y6A2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
CYP46A1Q9Y6A2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.2■■■□□ 2.43
CYP46A1Q9Y6A2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
CYP46A1Q9Y6A2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CYP46A1Q9Y6A2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
CYP46A1Q9Y6A2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.2■■■□□ 2.42
CYP46A1Q9Y6A2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CYP46A1Q9Y6A2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
CYP46A1Q9Y6A2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
CYP46A1Q9Y6A2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CYP46A1Q9Y6A2 LINC01003-201ENST00000564834 1764 ntBASIC30.19■■■□□ 2.42
CYP46A1Q9Y6A2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
CYP46A1Q9Y6A2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CYP46A1Q9Y6A2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.18■■■□□ 2.42
CYP46A1Q9Y6A2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.17■■■□□ 2.42
CYP46A1Q9Y6A2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.17■■■□□ 2.42
CYP46A1Q9Y6A2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
CYP46A1Q9Y6A2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms