Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGB4Q9UN71 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHGB4Q9UN71 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
PCDHGB4Q9UN71 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGB4Q9UN71 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHGB4Q9UN71 AC136428.2-201ENST00000563187 214 ntBASIC24.58■■□□□ 1.53
PCDHGB4Q9UN71 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
PCDHGB4Q9UN71 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHGB4Q9UN71 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGB4Q9UN71 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHGB4Q9UN71 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHGB4Q9UN71 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.55■■□□□ 1.52
PCDHGB4Q9UN71 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGB4Q9UN71 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHGB4Q9UN71 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.55■■□□□ 1.52
PCDHGB4Q9UN71 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHGB4Q9UN71 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGB4Q9UN71 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHGB4Q9UN71 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGB4Q9UN71 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHGB4Q9UN71 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHGB4Q9UN71 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
PCDHGB4Q9UN71 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.52■■□□□ 1.52
PCDHGB4Q9UN71 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHGB4Q9UN71 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHGB4Q9UN71 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
PCDHGB4Q9UN71 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGB4Q9UN71 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHGB4Q9UN71 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHGB4Q9UN71 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHGB4Q9UN71 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
PCDHGB4Q9UN71 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGB4Q9UN71 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHGB4Q9UN71 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHGB4Q9UN71 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGB4Q9UN71 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHGB4Q9UN71 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGB4Q9UN71 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHGB4Q9UN71 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHGB4Q9UN71 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGB4Q9UN71 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGB4Q9UN71 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHGB4Q9UN71 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHGB4Q9UN71 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
PCDHGB4Q9UN71 AP004833.2-201ENST00000532228 1454 ntBASIC24.45■■□□□ 1.5
PCDHGB4Q9UN71 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
PCDHGB4Q9UN71 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGB4Q9UN71 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGB4Q9UN71 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGB4Q9UN71 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
PCDHGB4Q9UN71 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDHGB4Q9UN71 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGB4Q9UN71 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGB4Q9UN71 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.43■■□□□ 1.5
PCDHGB4Q9UN71 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDHGB4Q9UN71 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDHGB4Q9UN71 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
PCDHGB4Q9UN71 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGB4Q9UN71 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDHGB4Q9UN71 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDHGB4Q9UN71 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDHGB4Q9UN71 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PCDHGB4Q9UN71 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.41■■□□□ 1.5
PCDHGB4Q9UN71 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDHGB4Q9UN71 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDHGB4Q9UN71 MIR762-201ENST00000390236 83 ntBASIC24.4■■□□□ 1.5
PCDHGB4Q9UN71 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDHGB4Q9UN71 AC127502.1-201ENST00000399971 1502 ntBASIC24.4■■□□□ 1.5
PCDHGB4Q9UN71 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHGB4Q9UN71 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDHGB4Q9UN71 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
PCDHGB4Q9UN71 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.39■■□□□ 1.49
PCDHGB4Q9UN71 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PCDHGB4Q9UN71 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHGB4Q9UN71 CHML-205ENST00000638160 705 ntTSL 3 BASIC24.38■■□□□ 1.49
PCDHGB4Q9UN71 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PCDHGB4Q9UN71 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHGB4Q9UN71 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGB4Q9UN71 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.37■■□□□ 1.49
PCDHGB4Q9UN71 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGB4Q9UN71 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHGB4Q9UN71 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
PCDHGB4Q9UN71 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.36■■□□□ 1.49
PCDHGB4Q9UN71 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB4Q9UN71 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB4Q9UN71 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHGB4Q9UN71 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB4Q9UN71 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB4Q9UN71 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB4Q9UN71 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB4Q9UN71 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB4Q9UN71 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB4Q9UN71 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHGB4Q9UN71 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PCDHGB4Q9UN71 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHGB4Q9UN71 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHGB4Q9UN71 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHGB4Q9UN71 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHGB4Q9UN71 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.33■■□□□ 1.48
PCDHGB4Q9UN71 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 1038.8 ms