Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Particl-201ENSMUST00000205370 1560 ntBASIC20.04■□□□□ 0.8
Col13a1Q9R1N9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Col13a1Q9R1N9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Col13a1Q9R1N9 Gm22567-201ENSMUST00000175542 342 ntBASIC20.03■□□□□ 0.8
Col13a1Q9R1N9 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col13a1Q9R1N9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col13a1Q9R1N9 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col13a1Q9R1N9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col13a1Q9R1N9 Gm27502-201ENSMUST00000183495 199 ntBASIC20.01■□□□□ 0.79
Col13a1Q9R1N9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col13a1Q9R1N9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col13a1Q9R1N9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col13a1Q9R1N9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Col13a1Q9R1N9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.99■□□□□ 0.79
Col13a1Q9R1N9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col13a1Q9R1N9 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Col13a1Q9R1N9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col13a1Q9R1N9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Col13a1Q9R1N9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.97■□□□□ 0.79
Col13a1Q9R1N9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col13a1Q9R1N9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.96■□□□□ 0.79
Col13a1Q9R1N9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col13a1Q9R1N9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Col13a1Q9R1N9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Col13a1Q9R1N9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Col13a1Q9R1N9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.95■□□□□ 0.78
Col13a1Q9R1N9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Col13a1Q9R1N9 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.95■□□□□ 0.78
Col13a1Q9R1N9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Col13a1Q9R1N9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col13a1Q9R1N9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Col13a1Q9R1N9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Col13a1Q9R1N9 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.93■□□□□ 0.78
Col13a1Q9R1N9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col13a1Q9R1N9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Col13a1Q9R1N9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Col13a1Q9R1N9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Col13a1Q9R1N9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col13a1Q9R1N9 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col13a1Q9R1N9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col13a1Q9R1N9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Col13a1Q9R1N9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col13a1Q9R1N9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Col13a1Q9R1N9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.91■□□□□ 0.78
Col13a1Q9R1N9 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.91■□□□□ 0.78
Col13a1Q9R1N9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Col13a1Q9R1N9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Col13a1Q9R1N9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.9■□□□□ 0.78
Col13a1Q9R1N9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col13a1Q9R1N9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col13a1Q9R1N9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.9■□□□□ 0.78
Col13a1Q9R1N9 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Col13a1Q9R1N9 Gm30023-201ENSMUST00000197970 889 ntBASIC19.89■□□□□ 0.77
Col13a1Q9R1N9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.88■□□□□ 0.77
Col13a1Q9R1N9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col13a1Q9R1N9 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col13a1Q9R1N9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col13a1Q9R1N9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col13a1Q9R1N9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
Col13a1Q9R1N9 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col13a1Q9R1N9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col13a1Q9R1N9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.86■□□□□ 0.77
Col13a1Q9R1N9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.86■□□□□ 0.77
Col13a1Q9R1N9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col13a1Q9R1N9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col13a1Q9R1N9 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col13a1Q9R1N9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col13a1Q9R1N9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.85■□□□□ 0.77
Col13a1Q9R1N9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.85■□□□□ 0.77
Col13a1Q9R1N9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col13a1Q9R1N9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col13a1Q9R1N9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col13a1Q9R1N9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col13a1Q9R1N9 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Col13a1Q9R1N9 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Col13a1Q9R1N9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col13a1Q9R1N9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Col13a1Q9R1N9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Col13a1Q9R1N9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Col13a1Q9R1N9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Col13a1Q9R1N9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col13a1Q9R1N9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col13a1Q9R1N9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Col13a1Q9R1N9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col13a1Q9R1N9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Col13a1Q9R1N9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Col13a1Q9R1N9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
Col13a1Q9R1N9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col13a1Q9R1N9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col13a1Q9R1N9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Col13a1Q9R1N9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Col13a1Q9R1N9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.79■□□□□ 0.76
Col13a1Q9R1N9 Amer2-203ENSMUST00000225247 2662 ntBASIC19.79■□□□□ 0.76
Col13a1Q9R1N9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.78■□□□□ 0.76
Col13a1Q9R1N9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col13a1Q9R1N9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col13a1Q9R1N9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col13a1Q9R1N9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col13a1Q9R1N9 Mir3960-201ENSMUST00000198213 73 ntBASIC19.76■□□□□ 0.75
Col13a1Q9R1N9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms