Protein–RNA interactions for Protein: Q9NTX7

RNF146, E3 ubiquitin-protein ligase RNF146, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF146Q9NTX7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
RNF146Q9NTX7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RNF146Q9NTX7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
RNF146Q9NTX7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.58■■■□□ 2.33
RNF146Q9NTX7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
RNF146Q9NTX7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
RNF146Q9NTX7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
RNF146Q9NTX7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.57■■■□□ 2.32
RNF146Q9NTX7 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
RNF146Q9NTX7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
RNF146Q9NTX7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.56■■■□□ 2.32
RNF146Q9NTX7 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.56■■■□□ 2.32
RNF146Q9NTX7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
RNF146Q9NTX7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.55■■■□□ 2.32
RNF146Q9NTX7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
RNF146Q9NTX7 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
RNF146Q9NTX7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.54■■■□□ 2.32
RNF146Q9NTX7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RNF146Q9NTX7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
RNF146Q9NTX7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
RNF146Q9NTX7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
RNF146Q9NTX7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.52■■■□□ 2.32
RNF146Q9NTX7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.31
RNF146Q9NTX7 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
RNF146Q9NTX7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.5■■■□□ 2.31
RNF146Q9NTX7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.5■■■□□ 2.31
RNF146Q9NTX7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.5■■■□□ 2.31
RNF146Q9NTX7 AC110285.7-201ENST00000624417 1536 ntBASIC29.5■■■□□ 2.31
RNF146Q9NTX7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RNF146Q9NTX7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RNF146Q9NTX7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
RNF146Q9NTX7 AC008813.1-201ENST00000536597 885 ntBASIC29.49■■■□□ 2.31
RNF146Q9NTX7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
RNF146Q9NTX7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
RNF146Q9NTX7 ST7-AS1-201ENST00000456775 1889 ntBASIC29.48■■■□□ 2.31
RNF146Q9NTX7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
RNF146Q9NTX7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RNF146Q9NTX7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RNF146Q9NTX7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
RNF146Q9NTX7 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RNF146Q9NTX7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.47■■■□□ 2.31
RNF146Q9NTX7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
RNF146Q9NTX7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
RNF146Q9NTX7 GPX1-201ENST00000419349 1106 ntBASIC29.46■■■□□ 2.31
RNF146Q9NTX7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
RNF146Q9NTX7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC29.45■■■□□ 2.31
RNF146Q9NTX7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.45■■■□□ 2.31
RNF146Q9NTX7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
RNF146Q9NTX7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RNF146Q9NTX7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.44■■■□□ 2.3
RNF146Q9NTX7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RNF146Q9NTX7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
RNF146Q9NTX7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
RNF146Q9NTX7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
RNF146Q9NTX7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.43■■■□□ 2.3
RNF146Q9NTX7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
RNF146Q9NTX7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RNF146Q9NTX7 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC29.42■■■□□ 2.3
RNF146Q9NTX7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RNF146Q9NTX7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RNF146Q9NTX7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RNF146Q9NTX7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.4■■■□□ 2.3
RNF146Q9NTX7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
RNF146Q9NTX7 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.4■■■□□ 2.3
RNF146Q9NTX7 RARRES2P2-201ENST00000394842 485 ntBASIC29.39■■■□□ 2.3
RNF146Q9NTX7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.39■■■□□ 2.3
RNF146Q9NTX7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC29.39■■■□□ 2.3
RNF146Q9NTX7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC29.39■■■□□ 2.3
RNF146Q9NTX7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC29.39■■■□□ 2.3
RNF146Q9NTX7 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.39■■■□□ 2.29
RNF146Q9NTX7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RNF146Q9NTX7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.39■■■□□ 2.29
RNF146Q9NTX7 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RNF146Q9NTX7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.38■■■□□ 2.29
RNF146Q9NTX7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
RNF146Q9NTX7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RNF146Q9NTX7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.37■■■□□ 2.29
RNF146Q9NTX7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.37■■■□□ 2.29
RNF146Q9NTX7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RNF146Q9NTX7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RNF146Q9NTX7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RNF146Q9NTX7 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RNF146Q9NTX7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RNF146Q9NTX7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC29.36■■■□□ 2.29
RNF146Q9NTX7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RNF146Q9NTX7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RNF146Q9NTX7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RNF146Q9NTX7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RNF146Q9NTX7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
RNF146Q9NTX7 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RNF146Q9NTX7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.34■■■□□ 2.29
RNF146Q9NTX7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC29.34■■■□□ 2.29
RNF146Q9NTX7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RNF146Q9NTX7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.33■■■□□ 2.29
RNF146Q9NTX7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.33■■■□□ 2.29
RNF146Q9NTX7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RNF146Q9NTX7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.33■■■□□ 2.29
RNF146Q9NTX7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RNF146Q9NTX7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RNF146Q9NTX7 RNF126P1-201ENST00000567452 1320 ntBASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms